CX309020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_STAAB (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=ndk PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF+MIKPD VQR L+GE+I R E+KG L G KLM V AE HY + KPF+ LI Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_STAA9 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain JH9) GN=ndk PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF+MIKPD VQR L+GE+I R E+KG L G KLM V AE HY + KPF+ LI Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_STAA8 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=ndk PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF+MIKPD VQR L+GE+I R E+KG L G KLM V AE HY + KPF+ LI Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_STAA3 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain USA300) GN=ndk PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF+MIKPD VQR L+GE+I R E+KG L G KLM V AE HY + KPF+ LI Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_STAA2 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain JH1) GN=ndk PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF+MIKPD VQR L+GE+I R E+KG L G KLM V AE HY + KPF+ LI Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_STAA1 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=ndk PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF+MIKPD VQR L+GE+I R E+KG L G KLM V AE HY + KPF+ LI Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_MYCA9 (Nucleoside diphosphate kinase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=ndk PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13 Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+T ++IKPDGV+RGLVGE++ R E+KG +L L+L VD A HY + + KPFFGSL+ Sbjct: 3 ERTLVLIKPDGVRRGLVGEVLNRIERKGLTLAALELKNVDDATARAHYAEHAEKPFFGSLL 63
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_CHICK (Nucleoside diphosphate kinase OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13 Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TFI IKPDGVQRGLVGEII RFE+KGF L +K + ++HY DL +PF+ L+ Sbjct: 6 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFVHASEDLLKQHYIDLKDRPFYPGLV 66
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK3_HUMAN (Nucleoside diphosphate kinase 3 OS=Homo sapiens GN=NME3 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.740e-13 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TF+ +KPDGVQR LVGEI+ RFE+KGF L LKL+ +HY +L +PF+G L+ Sbjct: 22 ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLV 82
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_STRU0 (Nucleoside diphosphate kinase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=ndk PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.191e-13 Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF MIKPDGV+RGL+GE++ R E++GF+L L+L+T R ++HY L K F+ LI Sbjct: 1 MEKTFFMIKPDGVRRGLIGEVLQRIERRGFTLDALQLVTPSREHLDEHYHQLKDKAFYPGLI 62 The following BLAST results are available for this feature:
BLAST of CX309020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309020 ID=CX309020; Name=CX309020; organism=Citrus clementina; type=EST; length=325bpback to top |