CX309020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_PROMS (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain AS9601) GN=ndk PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.191e-13 Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TFI IKPDGVQRG V EI+ RFEKKGF L GLK + + A+ HY +PFFG L+ Sbjct: 4 ERTFIAIKPDGVQRGYVSEILGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_PROM4 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ndk PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.191e-13 Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TF+ IKPDGVQRGLVGEI+ RFE+KGF L LK + R AE+HY +PFF L+ Sbjct: 4 ERTFLAIKPDGVQRGLVGEILSRFERKGFKLIALKQLIPSRALAEQHYGVHRERPFFKGLV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_PICTO (Nucleoside diphosphate kinase OS=Picrophilus torridus GN=ndk PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.191e-13 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+ I++KPDGV+R L+GE+I RFE+KG ++K LK+M V R AE HY KPFF L+ Sbjct: 1 MERCLILVKPDGVERNLIGEVISRFERKGLAIKALKMMRVTREQAEDHYSVHRLKPFFDDLV 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDKB_CANFA (Nucleoside diphosphate kinase B OS=Canis familiaris GN=NME2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.191e-13 Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 130 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 + E+TFI IKPDGVQRGLVG+I+ RFE+KGF L +K + ++HY DL +PF+ L+ Sbjct: 1 MAHQERTFIAIKPDGVQRGLVGDIVKRFEQKGFRLVAMKFLRASEDLLKEHYIDLKDRPFYPGLV 65
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_YEAST (Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae GN=YNK1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.086e-13 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1 Query: 136 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 + E+TFI +KPDGVQRGLV +I+ RFEKKG+ L +KL+ D E+HY + KPFF ++ Sbjct: 4 QTERTFIAVKPDGVQRGLVSQILSRFEKKGYKLVAIKLVKADDKLLEQHYAEHVGKPFFPKMV 66
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_SULSO (Nucleoside diphosphate kinase OS=Sulfolobus solfataricus GN=ndk PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.086e-13 Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ++TF+MIKPDGV+RGL+GEII RFEK+G + LK++ + R AEK YE+ K FF L+ Sbjct: 4 QRTFVMIKPDGVKRGLIGEIISRFEKRGLKIVSLKMVKMSRDTAEKLYEEHKGKSFFEELV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_METLZ (Nucleoside diphosphate kinase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=ndk PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.086e-13 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFF 312 ME+TF+MIKPDGVQRGLVGEI+ RFE KGF + K + +KHYE+ +KPF+ Sbjct: 1 MERTFVMIKPDGVQRGLVGEILSRFENKGFKIVAGKFGVLAESIVDKHYEEHLAKPFY 58
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_HALWD (Nucleoside diphosphate kinase OS=Haloquadratum walsbyi (strain DSM 16790) GN=ndk PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.086e-13 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TF+M+KPDGVQRGL+GEII RFE +G +L G K +D A HY + KPFF L+ Sbjct: 9 ERTFVMVKPDGVQRGLIGEIISRFEDRGLTLVGGKFTRLDTEVARDHYGEHKDKPFFDDLV 69
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_CLOTH (Nucleoside diphosphate kinase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=ndk PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.086e-13 Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+T +++KPD V+R LVGEII RFEK+ F++ LK+M +DR A +HY + KPFF +I Sbjct: 1 MERTLVILKPDSVKRKLVGEIISRFEKRNFTILHLKMMNIDRELACEHYSHVKDKPFFNDMI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_STAMF (Nucleoside diphosphate kinase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=ndk PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.056e-12 Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+T ++IKPDGV+RGL+GEII RFE+KG +K LK++ + R AE+ Y KPFF SLI Sbjct: 4 ERTLVLIKPDGVRRGLIGEIISRFERKGLKIKALKMLRLTREKAEEFYSVHRGKPFFVSLI 64 The following BLAST results are available for this feature:
BLAST of CX309020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309020 ID=CX309020; Name=CX309020; organism=Citrus clementina; type=EST; length=325bpback to top |