CX309020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_ROSS1 (Nucleoside diphosphate kinase OS=Roseiflexus sp. (strain RS-1) GN=ndk PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.397e-11 Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME++ I++KPD VQRGL+G I+ R E++G + G+KLM +D A +HY K FF SLI Sbjct: 1 MERSLIILKPDAVQRGLIGPILTRIEQRGLRIVGMKLMQIDESLARRHYAIHEGKAFFDSLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_TREPS (Nucleoside diphosphate kinase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=ndk PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.437e-11 Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E TF+M+KP +QR LVGE++ RFE+KG L L+L+ VD AE HY + KPF+ SLI Sbjct: 4 ETTFVMLKPGVLQRRLVGEVLSRFERKGLVLTALRLLCVDTATAELHYAEHREKPFYPSLI 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_TREPA (Nucleoside diphosphate kinase OS=Treponema pallidum GN=ndk PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.437e-11 Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E TF+M+KP +QR LVGE++ RFE+KG L L+L+ VD AE HY + KPF+ SLI Sbjct: 4 ETTFVMLKPGVLQRRLVGEVLSRFERKGLVLTALRLLCVDTATAELHYAEHREKPFYPSLI 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_METMJ (Nucleoside diphosphate kinase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=ndk PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.437e-11 Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSL 321 M++TF+M+KPDGVQRGLVGEI+ RFE KG L G KL + + Y + KPFF L Sbjct: 1 MDRTFVMVKPDGVQRGLVGEIVSRFEAKGLKLVGAKLELLPEGRVVEQYREHLEKPFFPGL 61
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_METS5 (Nucleoside diphosphate kinase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=ndk PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.795e-11 Identity = 29/61 (47.54%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ++TF+MIKPDGV+R L+GEI+ R E+KG + +K++ +DR A K YE+ K FF L+ Sbjct: 4 QKTFVMIKPDGVRRKLIGEIVGRIERKGLRIAAMKMVKIDRETANKLYEEHIGKSFFNELV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_DEHE1 (Nucleoside diphosphate kinase OS=Dehalococcoides ethenogenes (strain 195) GN=ndk PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.795e-11 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+T +++KPDGV RGL GEI+ R EK G + GL+++ +D A+KHY +PFF L+ Sbjct: 1 MERTLLLVKPDGVNRGLSGEILGRMEKLGLKMIGLRMLQMDAVLADKHYAPHRERPFFKDLV 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_AERPE (Nucleoside diphosphate kinase OS=Aeropyrum pernix GN=ndk PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.795e-11 Identity = 27/62 (43.55%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 +++T +++KPDGV+RGL+GE++ R E+KG + +K+M + R AE+ Y KPFFG L+ Sbjct: 3 VQRTLLVVKPDGVERGLIGEVVSRVERKGLKIVAMKMMRLTREKAEEFYSVHRDKPFFGELV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_PARD8 (Nucleoside diphosphate kinase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ndk PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.568e-11 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFF 312 ME+T +++KP VQRGL+GEI+ RFEKKG L G+K++ + +HY L KPFF Sbjct: 1 MEKTLVILKPCTVQRGLIGEIVTRFEKKGLRLAGMKMVWLTDEILSEHYAHLKEKPFF 58
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_METHJ (Nucleoside diphosphate kinase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=ndk PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.568e-11 Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSL 321 ME+TF+M+KPDGVQRGL+GE+I RFE++GF + + + +HY + KPFF L Sbjct: 1 MERTFLMVKPDGVQRGLIGEVITRFERRGFKMVASRFEKLPDARVMEHYAEHVQKPFFPGL 61
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_FERNB (Nucleoside diphosphate kinase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=ndk PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.884e-11 Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF+++KP+ V+RGLVGEI+ RFE++G + GLK + + R AEK YE K F+ L+ Sbjct: 1 MERTFVILKPNAVRRGLVGEILKRFEQRGIKIVGLKFLKMTREQAEKLYEPHKGKQFYDELL 62 The following BLAST results are available for this feature:
BLAST of CX309020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309020 ID=CX309020; Name=CX309020; organism=Citrus clementina; type=EST; length=325bpback to top |