CX309020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_LISMC (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=ndk PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.615e-15 Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 MEQT++M+KPDGV+RGL+GEI+ R EKKG + KLM +DR AEKHY + K FF LI Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDKC_DICDI (Nucleoside diphosphate kinase, cytosolic OS=Dictyostelium discoideum GN=ndkC-1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.615e-15 Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 118 VSLNLKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 +S N E+TF+ +KPDGV RGLVGEII R+EKKGF L GLK + + AE HY + +PFFG L+ Sbjct: 1 MSTNKVNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLV 69
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_LISW6 (Nucleoside diphosphate kinase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=ndk PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.639e-15 Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 MEQT++M+KPDGV+RGL+GEI+ + EKKG L KL+ +DR AE+HY + KPFF LI Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVAKIEKKGIKLVAGKLIQIDRKLAEQHYAEHIGKPFFEDLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_EXISA (Nucleoside diphosphate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=ndk PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.639e-15 Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF+M+KPDGV+RGL+GEII RFE KG++L L+++T AE HY + KPFFG L+ Sbjct: 1 MEKTFLMVKPDGVKRGLIGEIISRFENKGYTLNRLEMVTPSVEVAEAHYAEHKEKPFFGELV 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDKA_MOUSE (Nucleoside diphosphate kinase A OS=Mus musculus GN=Nme1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.639e-15 Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TFI IKPDGVQRGLVGEII RFE+KGF L GLK + ++HY DL +PFF L+ Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFLQASEDLLKEHYTDLKDRPFFTGLV 65
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_SYNSC (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9605) GN=ndk PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.128e-14 Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TFI IKPDGVQRGLVGEI+ RFE+KGF L GLK +T R AE+HY +PFF L+ Sbjct: 3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLV 63
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.128e-14 Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TFI IKPDGVQRGLVGEI+ RFE+KGF L GLK +T R AE+HY +PFF L+ Sbjct: 3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLV 63
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.128e-14 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TFI IKPDGVQRGL+GEI+ RFE+KGF L GLK +T R AE+HY +PFF L+ Sbjct: 4 ERTFIAIKPDGVQRGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_HALMA (Nucleoside diphosphate kinase OS=Haloarcula marismortui GN=ndk PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.128e-14 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 130 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 + E E+TF+M+KPDGVQRGL+G+I+ RFE +G + G K M +D+ AE+HY + KPFF L+ Sbjct: 1 MSEHERTFVMVKPDGVQRGLIGDIVSRFEDRGLKMVGGKFMQIDQELAEEHYGEHEDKPFFDGLV 65
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_DESHY (Nucleoside diphosphate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=ndk PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.128e-14 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFF 312 ME+TFIM+KPD VQRGLVG+II RFE KG L G+KLM+VD+ AE+HY + K FF Sbjct: 1 MEKTFIMLKPDAVQRGLVGQIIARFETKGCKLVGMKLMSVDQALAEQHYAEHKGKSFF 58 The following BLAST results are available for this feature:
BLAST of CX309020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309020 ID=CX309020; Name=CX309020; organism=Citrus clementina; type=EST; length=325bpback to top |