CX309020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_SYNJB (Nucleoside diphosphate kinase OS=Synechococcus sp. GN=ndk PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.283e-14 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TFI IKPDGVQRGLVG II R E +G+ L GLKL+ V + AE HY + +PFF SL+ Sbjct: 1 MERTFIAIKPDGVQRGLVGTIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHKERPFFHSLV 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.283e-14 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF+ IKPDGVQRGLVGEI+ RFE+KGF L GLK +T R A +HY +PFF L+ Sbjct: 3 MERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_HALLT (Nucleoside diphosphate kinase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=ndk PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.283e-14 Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TF+M+KPDGVQRGL+GEI+ RFE++G L G K M +D A +HY + KPFF L+ Sbjct: 6 ERTFVMVKPDGVQRGLIGEIVSRFEERGLKLVGGKFMQIDEDLAHQHYGEHEGKPFFDGLV 66
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_FRASC (Nucleoside diphosphate kinase OS=Frankia sp. (strain CcI3) GN=ndk PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.283e-14 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 +E+T I++KPDGV RGLVGE++ R E+KG +L L+L T++R AE HY + +SKPFFG L+ Sbjct: 3 VERTLILVKPDGVSRGLVGEVVGRLERKGLTLVALELRTLERSVAETHYGEHASKPFFGELV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_SYNP6 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndk PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.288e-14 Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TFI IKPDGVQRGLVG II RFE+KGF L GLK + R AE+HY +PFF L+ Sbjct: 1 MERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLV 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_SYNE7 (Nucleoside diphosphate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=ndk PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.288e-14 Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TFI IKPDGVQRGLVG II RFE+KGF L GLK + R AE+HY +PFF L+ Sbjct: 1 MERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLV 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_IGNH4 (Nucleoside diphosphate kinase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=ndk PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.288e-14 Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+ F+MIKPDGV+RGLVGEII R E+KG + +K++ +DR AE+ YE+ KPFF LI Sbjct: 1 MEREFVMIKPDGVKRGLVGEIISRIERKGLKIVAMKMLKLDREMAERLYEEHKGKPFFDDLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_FRAAA (Nucleoside diphosphate kinase OS=Frankia alni (strain ACN14a) GN=ndk PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.288e-14 Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+T I++KPDGV RGLVGE++ R E+KG +L L+L T++R AE HY + +SKPFFG L+ Sbjct: 4 ERTLILVKPDGVSRGLVGEVVGRLERKGLTLVALELRTLERSVAETHYGEHASKPFFGELV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_DEIGD (Nucleoside diphosphate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=ndk PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.288e-14 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 ME+TF MIKPDGV+RGL EI+ R +KKG+ + GLK M + R AE+HY + +PFFG L+ Sbjct: 1 MERTFAMIKPDGVRRGLTPEILARIQKKGYRVVGLKQMLISRELAERHYAEHRERPFFGELV 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_CORJK (Nucleoside diphosphate kinase OS=Corynebacterium jeikeium (strain K411) GN=ndk PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.288e-14 Identity = 38/61 (62.30%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+T I+IKPDGV+ G VGEII R EKKG L L L T DR AEKHY + S KPFFG L+ Sbjct: 3 ERTLILIKPDGVKNGHVGEIISRIEKKGLKLVELDLRTADRETAEKHYAEHSDKPFFGELV 63 The following BLAST results are available for this feature:
BLAST of CX309020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309020 ID=CX309020; Name=CX309020; organism=Citrus clementina; type=EST; length=325bpback to top |