CX309032

Overview
NameCX309032
Unique NameCX309032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length462
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 5.208e-28
Identity = 58/153 (37.91%), Postives = 96/153 (62.75%), Query Frame = -1
Query:    4 VNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKS-QPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDF---ATPSNEPVDMGEALGLSVQKARPL 450
            + E +++N+ YL+A++KE +RL+P+ P+ +P    E+  + GYN+   T+++IN W +QRD  +W    +  +PER L     +D  G+N   +PFGSGRR CPG++ AL + E T+A L+  FD+   A P+ +  D+ EA+G+ V +  PL
Sbjct:  339 IKEKEVENMKYLKAVIKEVLRLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHL--DSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAGPNGDQPDLTEAIGIDVCRKFPL 489          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.802e-28
Identity = 54/142 (38.03%), Postives = 86/142 (60.56%), Query Frame = -1
Query:   31 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALG 453
            QV E DI+ L YLQA++KE +RL  A PL +PH ++ +  + GY++P  +++++N W L  +P  W++P + +PERF      ++  G +F  LPFG GRR+CPG+  AL ++  TL  L+  F+   P  +  +D  E  G
Sbjct:  345 QVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGG 486          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 6.802e-28
Identity = 52/142 (36.62%), Postives = 88/142 (61.97%), Query Frame = -1
Query:   31 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALG 453
            QV E D++ L YLQA++KE +RL  A PL +PH ++ +  + G+++P  +++++N W L  +P +W++P + +PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  T+  L+  F+   P  +  +D  E  G
Sbjct:  345 QVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGG 486          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.802e-28
Identity = 49/132 (37.12%), Postives = 84/132 (63.64%), Query Frame = -1
Query:   58 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE 453
            Q+ E D++NL YLQA++KE +RL  A PL +PH ++ +  + G+++P  +++++N W L  +P  W++P + +PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  T+  L+  F+   P  +
Sbjct:  345 QITEPDVQNLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQ 476          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.802e-28
Identity = 51/132 (38.64%), Postives = 82/132 (62.12%), Query Frame = -1
Query:   58 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE 453
            QV E D++ L YLQA++KE +RL  A PL +PH ++ +  + GY++P  +++++N W L  +P  W+ P + +PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  TL  L+  F+   P  +
Sbjct:  345 QVTEPDMQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQ 476          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 8.883e-28
Identity = 54/142 (38.03%), Postives = 86/142 (60.56%), Query Frame = -1
Query:   31 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFD-FATPSNEPVDMGEALG 453
            QV E D+  L YLQA++KE +RL  A PL +PH ++ +  + GY++P  +++++N W L  +P  W++P + +PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  T+  L+  F+    P  + VD  E  G
Sbjct:  345 QVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVDTTEKGG 486          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 8.883e-28
Identity = 61/155 (39.35%), Postives = 95/155 (61.29%), Query Frame = -1
Query:    4 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPL 459
            K  + E+D++ L YL++++KE +RL+P S L IP + I    I GY +P  T+++IN W + RDP+ W +  +  PERF      ID +G +FE +PFG+GRR CPG++F L  +   LA LL+ F++  P+    E +DM E  G++V +   L
Sbjct:  343 KEIIRETDLEELSYLKSVIKETLRLHPPSQL-IPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERF--NDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKL 494          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.160e-27
Identity = 55/156 (35.26%), Postives = 98/156 (62.82%), Query Frame = -1
Query:    1 KRQVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPLE 459
            K ++ E D++ + YL+ ++KE  RL+P  P  +P + + +  I GY++P +  + I+ + + RDP+ W  P +  PERF   +  I+ +GQ++ELLPFG+GRR+CPG++  + ++E  L  +L+ FD++ P+    + +DM E   L++ K  PLE
Sbjct:  341 KERITEEDLEKVEYLKLVIKETFRLHPPGPFLLPRQVMSDIEIQGYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERF--ANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPLE 494          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.515e-27
Identity = 54/142 (38.03%), Postives = 86/142 (60.56%), Query Frame = -1
Query:   31 QVNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVWEEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSNE-PVDMGEALG 453
            QV E DI+ L YLQA++KE +RL  A PL +PH ++ +  + GY++P  +++++N W L  +P  W++P + +PERF      ++  G +F  LPFG GRR+CPG+  AL ++  TL  L+  F+   P  +  +D  E  G
Sbjct:  346 QVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGG 487          
BLAST of CX309032 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.515e-27
Identity = 59/154 (38.31%), Postives = 95/154 (61.69%), Query Frame = -1
Query:    1 VNESDIKNLVYLQAILKEAMRLYPASPLSIPHKSIEECTISGYNVPTSTQLVINVWKLQRDPRVW-EEPCKSQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLHGFDFATPSN---EPVDMGEALGLSVQKARPLE 450
            V E D+KNL Y +A++KE +R+ P  PL IP   I++  I+GY++P  T + +N W + RD + W   P + +PERFL   K++D +G ++E +PFGSGRR CPG+     ++E   A LL  F+F  P+    + ++M    GL++ K++ L+
Sbjct:  342 VTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFL--EKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLK 493          
The following BLAST results are available for this feature:
BLAST of CX309032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 361
Match NameE-valueIdentityDescription
C71AD_ARATH5.208e-2837.91Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
TCMO_PHAAU6.802e-2838.03Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_PEA6.802e-2836.62Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_HELTU6.802e-2837.12Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_GLYEC6.802e-2838.64Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_ZINEL8.883e-2838.03Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
C71D8_SOYBN8.883e-2839.35Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71B8_ARATH1.160e-2735.26Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_SOYBN1.515e-2738.03Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C83A1_ARATH1.515e-2738.31Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC21007E12Rv AbsLeaSub1 Citrus clementina cDNA clone C21007E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309032 ID=CX309032; Name=CX309032; organism=Citrus clementina; type=EST; length=462bp
TTCAAGTGGTCTAGCTTTCTGGACACTCAACCCTAGTGCCTCTCCCATGT
CCACCGGTTCATTTGATGGGGTTGCAAAATCAAAGCCATGAAGTAAAGCA
GCAAGTGTAAATTCCATAACTTGGAGGGCAAATGAAACTCCAGGACAAGC
TCTTCTACCACTACCAAAAGGTAACAATTCAAAATTTTGTCCTCTGACAT
CAATATCCTTGTGCCTTGTCAAAAATCTTTCTGGCTGAGACTTACAAGGC
TCTTCCCAGACACGTGGATCACGTTGAAGCTTCCAAACATTGATAACAAG
TTGTGTGCTGGTAGGGACATTATAACCACTAATCGTGCACTCTTCTATAG
ACTTGTGTGGAATTGAGAGTGGCGAAGCAGGATACAAACGCATTGCTTCT
TTGAGAATGGCTTGCAAGTAAACTAAATTCTTTATATCTGACTCATTCAC
TTGCCTTTTCGT
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