CX309041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309041 vs. ExPASy Swiss-Prot
Match: ABCCD_DICDI (ABC transporter C family member 13 OS=Dictyostelium discoideum GN=abcC13 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.527e-19 Identity = 43/99 (43.43%), Postives = 66/99 (66.67%), Query Frame = -3 Query: 2 TILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEA--VGLETFVKESGISFSVGQRQLICLARALLKSS 292 +IL+DG++I + DLR +VPQ PF+F G++R N+DPF+ D +IW LEK +K + + + LET ++E G S GQ+QL+CL+R +LK+S Sbjct: 1160 SILIDGIDISKIGLHDLRSSLGIVPQDPFIFSGTIRLNIDPFNKYTDSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNS 1258
BLAST of CX309041 vs. ExPASy Swiss-Prot
Match: MRP7_MOUSE (Multidrug resistance-associated protein 7 OS=Mus musculus GN=Abcc10 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.284e-18 Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = -3 Query: 11 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALL 289 +L+D ++ + +LR + AV+PQ PFLF G++R+NLDP +++D +W LE+CH+ E A+ GL+ + E G + S+GQRQL+CLARALL Sbjct: 1313 VLLDNVDTSQLELAELRSQLAVIPQEPFLFSGTIRENLDPQGLHEDRALWQALEQCHLSEVAVAMGGLDGELGERGQNLSLGQRQLLCLARALL 1406
BLAST of CX309041 vs. ExPASy Swiss-Prot
Match: MRP7_HUMAN (Multidrug resistance-associated protein 7 OS=Homo sapiens GN=ABCC10 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.284e-18 Identity = 42/94 (44.68%), Postives = 66/94 (70.21%), Query Frame = -3 Query: 11 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALL 289 +L+DG++ + LR + A++PQ PFLF G++R+NLDP ++ D +W L++CH+ E + ++ GL+ + E G S S+GQRQL+CLARALL Sbjct: 1304 VLLDGVDTSQLELAQLRSQLAIIPQEPFLFSGTVRENLDPQGLHKDRALWQALKQCHLSEVITSMGGLDGELGEGGRSLSLGQRQLLCLARALL 1397
BLAST of CX309041 vs. ExPASy Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.677e-18 Identity = 44/98 (44.90%), Postives = 66/98 (67.35%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVE--AVGLETFVKESGISFSVGQRQLICLARALLKSS 289 IL+D ++ + DLR +++PQSP LF G++R N+DPF ++D +W LE+ H+K+ ++ GL+ V E G +FSVGQRQL+ LARALL+ S Sbjct: 1293 ILIDDYDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRS 1390
BLAST of CX309041 vs. ExPASy Swiss-Prot
Match: MRP3_MOUSE (Canalicular multispecific organic anion transporter 2 OS=Mus musculus GN=Abcc3 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.190e-18 Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEV--EAVGLETFVKESGISFSVGQRQLICLARALLKSS 289 I++DGLN+ + + DLR + ++PQ P LF G+LR NLDPF + IW LE H+ V + GL+ E G + SVGQRQL+CLARALL+ S Sbjct: 1343 IVIDGLNVAHIGLHDLRSQLTIIPQDPILFSGTLRMNLDPFGRYSEEDIWRALELSHLNTFVSSQPAGLDFQCAEGGDNLSVGQRQLVCLARALLRKS 1440
BLAST of CX309041 vs. ExPASy Swiss-Prot
Match: ABCC1_DICDI (ABC transporter C family member 1 OS=Dictyostelium discoideum GN=abcC1 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.860e-18 Identity = 42/99 (42.42%), Postives = 66/99 (66.67%), Query Frame = -3 Query: 2 TILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEA--VGLETFVKESGISFSVGQRQLICLARALLKSS 292 +IL+DG++I + +LR +VPQ PF+F G++R N+DPF+ D +IW LEK +K + + + LET ++E G S GQ+QL+CL+R +LK+S Sbjct: 1173 SILIDGVDISKIGLHELRSSLGIVPQDPFIFSGTIRLNIDPFNKYTDSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNS 1271
BLAST of CX309041 vs. ExPASy Swiss-Prot
Match: ABCCC_DICDI (ABC transporter C family member 12 OS=Dictyostelium discoideum GN=abcC12 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.736e-18 Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = -3 Query: 8 TILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLK 292 +I +DG NI ++DLR A++PQ P LF G+LR+NLDPF+ D ++WS+L+ + + ++ GL + V E+G +FSVGQRQLI LARALL+ Sbjct: 1104 SISIDGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENLDPFNECPDHELWSILDDIQLSKVFKSTEEGLNSKVTENGENFSVGQRQLIVLARALLR 1200
BLAST of CX309041 vs. ExPASy Swiss-Prot
Match: MRP1_RAT (Multidrug resistance-associated protein 1 OS=Rattus norvegicus GN=Abcc1 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 4.879e-18 Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 289 I++DG+NI + +LR + ++PQ P LF GSLR NLDPF D ++W LE H+K V A+ L E G + SVGQRQL+CLARALL+ + Sbjct: 1352 IIIDGINIAKIGLHNLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWMALELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKT 1449
BLAST of CX309041 vs. ExPASy Swiss-Prot
Match: ABCC2_DICDI (ABC transporter C family member 2 OS=Dictyostelium discoideum GN=abcC2 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.879e-18 Identity = 42/99 (42.42%), Postives = 68/99 (68.69%), Query Frame = -3 Query: 2 TILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEA--VGLETFVKESGISFSVGQRQLICLARALLKSS 292 +I +DG++I + +LR +VPQ PF+F GS+R N+DPF+ D +IW+ LEK +K+ + + + LE+ V+E+G S GQ+QL+CL+R +LK+S Sbjct: 1194 SIFIDGVDISKVGLHELRDALGIVPQDPFIFSGSIRMNIDPFNKYTDDEIWTALEKVKLKDAISSMPLKLESGVQENGDGLSFGQKQLLCLSRTILKNS 1292
BLAST of CX309041 vs. ExPASy Swiss-Prot
Match: MRP1_MOUSE (Multidrug resistance-associated protein 1 OS=Mus musculus GN=Abcc1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.372e-18 Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 289 I++DG+NI + +LR + ++PQ P LF GSLR NLDPF D ++W LE H+K V A+ L E G + SVGQRQL+CLARALL+ + Sbjct: 1348 IIIDGVNIAKIGLHNLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWMALELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKT 1445 The following BLAST results are available for this feature:
BLAST of CX309041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309041 ID=CX309041; Name=CX309041; organism=Citrus clementina; type=EST; length=300bpback to top |