CX309046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A1_MOUSE (Eukaryotic initiation factor 4A-I OS=Mus musculus GN=Eif4a1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.035e-16 Identity = 36/80 (45.00%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 246 G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P Sbjct: 321 GSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A1_MACFA (Eukaryotic initiation factor 4A-I OS=Macaca fascicularis GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.035e-16 Identity = 36/80 (45.00%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 246 G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P Sbjct: 321 GSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.035e-16 Identity = 36/80 (45.00%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 246 G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P Sbjct: 321 GSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A1_BOVIN (Eukaryotic initiation factor 4A-I OS=Bos taurus GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.035e-16 Identity = 36/80 (45.00%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 246 G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P Sbjct: 321 GSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DHH1_YARLI (ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica GN=DHH1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.035e-16 Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 273 G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG G+AI + + +D L +++ +IK +P QID + Y+ Sbjct: 314 GTCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGIAINLI-NWNDRYNLYKIEQELGTEIKPIPAQIDKNLYV 401
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana GN=RH8 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.351e-16 Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 270 G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GRFG GLA+ + + D L +++ +IK++P ID + Y Sbjct: 417 GACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLI-TYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 503
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: RH12_ORYSJ (DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica GN=Os10g0503700 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.351e-16 Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 270 G R LV TDL RGIDI+ VN+VIN+D P +++TYLHRVGR+GRFG GLA+ + + D L +++ +IK +P QID + Y Sbjct: 433 GACRNLVCTDLFTRGIDIQAVNVVINFDFPKTSETYLHRVGRSGRFGHLGLAVNLI-TYEDRFNLYRIEQELGTEIKTIPPQIDLAVY 519
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DDX6_XENTR (Probable ATP-dependent RNA helicase ddx6 OS=Xenopus tropicalis GN=ddx6 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.351e-16 Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 16 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 273 R LV TDL RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLAI + + D L ++ + +IK +P ID S Y+ Sbjct: 385 RNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLI-TYDDRFNLKSIEEQLGTEIKPIPSSIDKSLYV 469
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DDX6_MOUSE (Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus GN=Ddx6 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.351e-16 Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 16 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 273 R LV TDL RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLAI + + D L ++ + +IK +P ID S Y+ Sbjct: 386 RNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLI-TYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DDX6_HUMAN (Probable ATP-dependent RNA helicase DDX6 OS=Homo sapiens GN=DDX6 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.351e-16 Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 16 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 273 R LV TDL RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLAI + + D L ++ + +IK +P ID S Y+ Sbjct: 386 RNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLI-TYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470 The following BLAST results are available for this feature:
BLAST of CX309046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 482
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309046 ID=CX309046; Name=CX309046; organism=Citrus clementina; type=EST; length=485bpback to top |