CX309046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: Y2004_STAAW (Probable DEAD-box ATP-dependent RNA helicase MW2004 OS=Staphylococcus aureus (strain MW2) GN=MW2004 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11 Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 19 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 213 ILVATD+ RG+DI V+ V N+D+P ++Y HR+GR GR G +G+A+TFV+ + D + Q++ Sbjct: 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPI-EMDYIRQIE 356
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: Y1985_STAAS (Probable DEAD-box ATP-dependent RNA helicase SAS1985 OS=Staphylococcus aureus (strain MSSA476) GN=SAS1985 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11 Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 19 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 213 ILVATD+ RG+DI V+ V N+D+P ++Y HR+GR GR G +G+A+TFV+ + D + Q++ Sbjct: 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPI-EMDYIRQIE 356
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: Y1965_STAAB (Probable DEAD-box ATP-dependent RNA helicase SAB1965c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB1965c PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11 Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 19 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 213 ILVATD+ RG+DI V+ V N+D+P ++Y HR+GR GR G +G+A+TFV+ + D + Q++ Sbjct: 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPI-EMDYIRQIE 356
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: Y1885_STAAN (Probable DEAD-box ATP-dependent RNA helicase SA1885 OS=Staphylococcus aureus (strain N315) GN=SA1885 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11 Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 19 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 213 ILVATD+ RG+DI V+ V N+D+P ++Y HR+GR GR G +G+A+TFV+ + D + Q++ Sbjct: 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPI-EMDYIRQIE 356
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: Y1688_STAEQ (Probable DEAD-box ATP-dependent RNA helicase SERP1688 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1688 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11 Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 19 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 213 ILVATD+ RG+DI V+ V N+D+P ++Y HR+GR GR G +G+A+TFV+ + D + Q++ Sbjct: 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPI-EMDYIRQIE 356
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: Y1679_STAES (Probable DEAD-box ATP-dependent RNA helicase SE_1679 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1679 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11 Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 19 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 213 ILVATD+ RG+DI V+ V N+D+P ++Y HR+GR GR G +G+A+TFV+ + D + Q++ Sbjct: 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPI-EMDYIRQIE 356
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: RRP3_ASPCL (ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus GN=rrp3 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11 Identity = 29/56 (51.79%), Postives = 43/56 (76.79%), Query Frame = 1 Query: 10 NKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 177 ++ ILVATD+ RG+DI V++V+N+D+P + TY+HRVGR R G G+AI+FV+ Sbjct: 343 SRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVT 398
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: ROK1_VANPO (ATP-dependent RNA helicase ROK1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ROK1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11 Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS---SASDSDILNQVQARFEVDIKELPEQIDTST 267 G+ L+ TD++ RG+D + VN+VINYD+P +A Y+HR+GR GR G G A+TF + S + I+N V + +I E E++ T Sbjct: 430 GDLWCLITTDVLARGVDFKGVNLVINYDVPRTAQAYVHRIGRTGRGGRSGKAVTFYTKEDSIAIKPIIN-VMKQSGSEISEWMEKVSKMT 518
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: RH52C_ORYSJ (DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica GN=Os11g0599500 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11 Identity = 34/91 (37.36%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYMPS 279 G+ ILVATD+ RG+DI V V+N+D+P+ D Y+HR+GR GR G GLA F + ++S + + + +E+P + PS Sbjct: 465 GHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE-NNSSMARSLAELMQESNQEVPAWLSRYAARPS 554
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: RH40_ORYSJ (DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica GN=Os01g0549400 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11 Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 171 G ILVATD+ RG+DI+ + +VINYD P + Y+HR+GR GR G G+A TF Sbjct: 443 GRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTF 497 The following BLAST results are available for this feature:
BLAST of CX309046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 482
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309046 ID=CX309046; Name=CX309046; organism=Citrus clementina; type=EST; length=485bpback to top |