CX309046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: PRP5_NEOFI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=prp5 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 19 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 252 IL+AT + RG+D++++ +V+NYD P+ + Y+HR GR GR G G A+TF L + Q R+ VDI + Q Sbjct: 862 ILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTF---------LTEEQERYSVDIAKALRQ 930
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: PRP5_ASPCL (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus clavatus GN=prp5 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 30/78 (38.46%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 19 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 252 +L+AT + RG+D++++ +V+NYD P+ + Y+HR GR GR G G A+TF L + Q R+ VDI + +Q Sbjct: 862 VLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTF---------LTEEQERYSVDIAKALKQ 930
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: PRP28_YEAST (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Saccharomyces cerevisiae GN=PRP28 PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 25/65 (38.46%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 16 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 210 +I++AT++ RG+DI V++V+N+ + D Y+HR+GR GR +G A++FVS+A D ++ ++ Sbjct: 489 QIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIREL 553
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DDX47_HUMAN (Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens GN=DDX47 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 13 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 258 + IL+ATD+ RG+DI V++V+N+D+P + Y+HRVGR R G G AITFV+ D ++ +++ + P Q D Sbjct: 314 RSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ-YDVELFQRIEHLIGKKLPGFPTQDD 394
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DDX47_BOVIN (Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus GN=DDX47 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 13 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 258 + IL+ATD+ RG+DI V++V+N+D+P + Y+HRVGR R G G AITFV+ D ++ +++ + P Q D Sbjct: 316 RSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ-YDVELFQRIEHLIGKKLPVFPTQDD 396
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DDX17_MOUSE (Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus GN=Ddx17 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 35/82 (42.68%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 252 G IL+ATD+ RG+D+E V VINYD P+S++ Y+HR+GR R KG A TF + N QAR + + E Q Sbjct: 388 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPG------NLKQARELIKVLEEANQ 463
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DDX17_HUMAN (Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 35/82 (42.68%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 252 G IL+ATD+ RG+D+E V VINYD P+S++ Y+HR+GR R KG A TF + N QAR + + E Q Sbjct: 388 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPG------NLKQARELIKVLEEANQ 463
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DBP8_LODEL (ATP-dependent RNA helicase DBP8 OS=Lodderomyces elongisporus GN=DBP8 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 258 G RIL+ATD+ RG+DI V +V+N+D+P D ++HRVGR R G KG AI+ + D + + ++ R + EL E +D Sbjct: 305 GAARILIATDVASRGLDIPTVELVVNFDIPADPDDFIHRVGRTARAGRKGDAISIIGE-KDIERIESIEERINKKM-ELLEGVD 386
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DBP8_ASPNC (ATP-dependent RNA helicase dbp8 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp8 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 16 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 252 R+LVATD+ RG+DI V +V+N+D+P + D Y+HRVGR R G KG ++T V D ++ ++ R ++E E+ Sbjct: 399 RLLVATDVASRGLDIPSVELVVNFDVPRNPDDYVHRVGRTARAGRKGESVTLVGQ-RDVSLVLAIEERVGRQMEEWSEE 476
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: DBP2_LODEL (ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus GN=DBP2 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 171 G+ I+VATD+ RGID++ + V+NYDMP + + Y+HR+GR GR G G AI+F Sbjct: 412 GSHSIMVATDVAARGIDVKGITHVVNYDMPGNIEDYVHRIGRTGRGGATGTAISF 466 The following BLAST results are available for this feature:
BLAST of CX309046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 482
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309046 ID=CX309046; Name=CX309046; organism=Citrus clementina; type=EST; length=485bpback to top |