CX309046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.463e-18 Identity = 40/85 (47.06%), Postives = 62/85 (72.94%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 261 G+ RIL++TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI F+ + D L +++ + I+ELP I T Sbjct: 310 GSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFIVN-EDVQALRELEQFYSTQIEELPSDIGT 393
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.463e-18 Identity = 40/83 (48.19%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI FV+ D +L+ +Q + V I+ELP + Sbjct: 328 GSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTK-DDERMLSDIQRFYNVVIEELPANV 409
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.463e-18 Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV+ D +L +Q + V I+ELP + Sbjct: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTK-DDERMLFDIQKFYNVVIEELPANV 409
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 3.217e-18 Identity = 40/85 (47.06%), Postives = 63/85 (74.12%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 261 G+ RIL++TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV++ D + +++ + I+ELP I T Sbjct: 309 GSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTN-EDVGAMRELEKFYSTQIEELPSDIAT 392
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.217e-18 Identity = 40/85 (47.06%), Postives = 63/85 (74.12%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 261 G+ RIL++TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV++ D + +++ + I+ELP I T Sbjct: 309 GSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTN-EDVGAMRELEKFYSTQIEELPSDIAT 392
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.217e-18 Identity = 38/83 (45.78%), Postives = 63/83 (75.90%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ATDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV +A D ++ +++ + I+E+P + Sbjct: 313 GSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFV-TAEDVRMMREIEQFYSTQIEEMPMNV 394
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_PICGU (ATP-dependent RNA helicase eIF4A OS=Pichia guilliermondii GN=TIF1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.217e-18 Identity = 39/83 (46.99%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ RIL+ATDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D ++ +++ + I+E+P I Sbjct: 310 GSSRILIATDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTD-EDVGMMREIEKFYSTQIEEMPANI 391
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.217e-18 Identity = 38/83 (45.78%), Postives = 63/83 (75.90%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ATDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV +A D ++ +++ + I+E+P + Sbjct: 311 GSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFV-TADDVRMMREIEQFYSTQIEEMPMNV 392
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_NEUCR (ATP-dependent RNA helicase eIF4A OS=Neurospora crassa GN=tif-1 PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 3.217e-18 Identity = 38/83 (45.78%), Postives = 63/83 (75.90%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ATDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV +A D ++ +++ + I+E+P + Sbjct: 312 GSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFV-TADDVRMMREIEQFYSTQIEEMPMNV 393
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.217e-18 Identity = 38/83 (45.78%), Postives = 63/83 (75.90%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ATDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV +A D ++ +++ + I+E+P + Sbjct: 313 GSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFV-TADDVRMMREIEQFYSTQIEEMPMNV 394 The following BLAST results are available for this feature:
BLAST of CX309046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 482
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309046 ID=CX309046; Name=CX309046; organism=Citrus clementina; type=EST; length=485bpback to top |