CX309065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13 Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 2 Query: 212 NMGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 ++ F+ +FS G KE RIL++GLD AGK+T+LY+L++G+VVSTIPTIGFNVE Sbjct: 8 SLASFFSNIFSLFEGKKETRILMIGLDGAGKSTLLYKLKLGDVVSTIPTIGFNVE 62
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13 Identity = 31/55 (56.36%), Postives = 45/55 (81.82%), Query Frame = 2 Query: 212 NMGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 N+ F+ +FS G K+ RIL++GLD AGK+T+LY+L++G++VST+PTIGFNVE Sbjct: 8 NLASFFSNIFSLFEGKKQTRILMIGLDGAGKSTLLYKLKLGDIVSTVPTIGFNVE 62
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13 Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG+ F+++ S +F N E R L+LGLD AGKTTILY+L++ E V+TIPTIGFNVE Sbjct: 1 MGLFFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVE 54
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARL17_HUMAN (ADP-ribosylation factor-like protein 17 OS=Homo sapiens GN=ARL17 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.386e-12 Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG +F +LF SL G K+ RIL+L LD AGKTTILY+L++GE V +PT+GF VE Sbjct: 1 MGNIFEKLFKSLLGKKKMRILILSLDTAGKTTILYKLKLGETVPAVPTVGFCVE 54
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.386e-12 Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = 2 Query: 227 FTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 F++ FS LF NKE RIL+LGLD AGKTTILY+L++ + V TIPT+GFNVE Sbjct: 9 FSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVE 58
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.983e-12 Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MGI+FTR++ LF ++E +++++GLDNAGKTTILY+ M EVV T PTIG NVE Sbjct: 1 MGILFTRIWR-LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVE 53
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.983e-12 Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MGI+FTR++ LF ++E +++++GLDNAGKTTILY+ M EVV T PTIG NVE Sbjct: 1 MGILFTRIWR-LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVE 53
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.983e-12 Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MGI+FTR++ LF ++E +++++GLDNAGKTTILY+ M EVV T PTIG NVE Sbjct: 1 MGILFTRIWR-LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVE 53
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.983e-12 Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MGI+FTR++ LF ++E +++++GLDNAGKTTILY+ M EVV T PTIG NVE Sbjct: 1 MGILFTRIWR-LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVE 53
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARFK_DICDI (ADP-ribosylation factor K OS=Dictyostelium discoideum GN=arrK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.532e-11 Identity = 30/55 (54.55%), Postives = 44/55 (80.00%), Query Frame = 2 Query: 212 NMGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 ++ F+ +FS G K+ RIL++GLD AGK+T+L++L++G+VV TIPTIGFNVE Sbjct: 8 SLASFFSNIFSLFEGKKDTRILMIGLDGAGKSTLLFKLKLGDVVLTIPTIGFNVE 62 The following BLAST results are available for this feature:
BLAST of CX309065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309065 ID=CX309065; Name=CX309065; organism=Citrus clementina; type=EST; length=378bpback to top |