CX309069

Overview
NameCX309069
Unique NameCX309069
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length394
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig974 contig Ccv1_Contig974:1..394. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_NEUCR (Eukaryotic translation initiation factor 3 subunit L OS=Neurospora crassa GN=NCU06279 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.074e-25
Identity = 56/129 (43.41%), Postives = 89/129 (68.99%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + QK+ QY+ I KKN+QMYAL+AIC++  P    +++T+++ LREKYG++++++QR   EA  IY+ELF  ACPKFI+P  P+F+EP  N   D     L +F+ EVK       ++S+L++Y++
Sbjct:  269 RTKNF-QKNAQYDSITKKNDQMYALIAICVAFQP--TRLDDTIHTALREKYGDQLLKLQRGGPEALPIYEELFRTACPKFISPVPPNFDEPEANI--DPIEHHLSVFMDEVKTNMFNPTIKSYLRLYTT 392          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_USTMA (Eukaryotic translation initiation factor 3 subunit L OS=Ustilago maydis GN=UM01228 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.075e-25
Identity = 58/136 (42.65%), Postives = 92/136 (67.65%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSF--EEPLVNYNQ-----DAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            + +QYH +S QY+QI K  ++MYALL++  +LCP    ++E + +Q+R+KYG++  +M R   E  + ++ELF YACPKFIT ++P++  EE LV Y Q     D  + QL++FL +VK Q   + VRSFL++Y++
Sbjct:  368 RLRQYHTRSYQYDQINKTADRMYALLSMACALCP--TRLDENIQTQMRDKYGDQFSKMTRPGAEGLAAFEELFIYACPKFITANSPAYHDEEALVEYKQKAVFPDPTQHQLRVFLSDVKTQLSNANVRSFLRLYTT 501          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_ASPCL (Eukaryotic translation initiation factor 3 subunit L OS=Aspergillus clavatus GN=ACLA_069410 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.185e-24
Identity = 56/129 (43.41%), Postives = 85/129 (65.89%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + +    Y+ I KKN+QMYAL+AIC++L P    +++T++S LREKYGE++IR+Q    EA  +++ELF  ACPKFI+P+ P F+ P VN   D       +F+ EVK       +RS+LK+Y++
Sbjct:  271 RTKNFQKGGNSYDAIAKKNDQMYALIAICVALHP--TRLDDTIHSALREKYGEQLIRLQHGGPEALPLFEELFRSACPKFISPTPPDFDNPAVNV--DPVDHHTAIFMDEVKNTLYNPTIRSYLKLYTT 395          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_SCLS1 (Eukaryotic translation initiation factor 3 subunit L OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_00570 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.504e-24
Identity = 54/129 (41.86%), Postives = 88/129 (68.22%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + QK+ QY+ I KKN+QMYAL+AIC++  P    +++T+++ LREKYG++++++QR   E+  I++ELF  ACPKFI+P+ P F+ P    N D     L +F+ EVK       V+S+L++Y++
Sbjct:  271 RTKNF-QKNAQYDSISKKNDQMYALIAICVAFHP--TRLDDTIHTALREKYGDQLLKLQRGGPESLPIFEELFRSACPKFISPTPPDFDNP--ELNVDPLEHHLSIFMDEVKTNMWSPTVKSYLRLYTT 394          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_BOTFB (Eukaryotic translation initiation factor 3 subunit L OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_06600 PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.504e-24
Identity = 54/129 (41.86%), Postives = 88/129 (68.22%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + QK+ QY+ I KKN+QMYAL+AIC++  P    +++T+++ LREKYG++++++QR   E+  I++ELF  ACPKFI+P+ P F+ P    N D     L +F+ EVK       V+S+L++Y++
Sbjct:  271 RTKNF-QKNAQYDSISKKNDQMYALIAICVAFHP--TRLDDTIHTALREKYGDQLLKLQRGGPESLPIFEELFRSACPKFISPTPPDFDNP--ELNVDPLEHHLSIFMDEVKTNMWSPTVKSYLRLYTT 394          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_ASPNC (Eukaryotic translation initiation factor 3 subunit L OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An16g04580 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.683e-24
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + +    Y+ I KKN+QMYAL+AIC++L P    +++T++S LREKYGE++ R+Q    EA  +++ELF  ACPKFI+P+ P FE P +N   D       +F+ EVK       +RS+LK+Y++
Sbjct:  271 RTKNFQKGGNSYDAIAKKNDQMYALIAICVALHP--TRLDDTIHSALREKYGEQLNRLQHGGPEALPLFEELFRSACPKFISPTPPDFENPALNV--DPVDHHTAIFMDEVKNTLYNPTIRSYLKLYTT 395          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_NEOFI (Eukaryotic translation initiation factor 3 subunit L OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_085780 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.003e-23
Identity = 53/129 (41.09%), Postives = 85/129 (65.89%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + +    Y+ I KKN+QMYAL+AIC++L P    +++T++S LREKYGE+++R+Q    +A  +++ELF  ACPKFI+P+ P F+ P +N   D       +F+ EVK       +RS+LK+Y++
Sbjct:  271 RTKNFQKGGNSYDAIAKKNDQMYALIAICVALHP--TRLDDTIHSALREKYGEQLLRLQHGGPDALPLFEELFRSACPKFISPTPPDFDNPALNI--DPVDHHTAIFMDEVKNTLYNPTIRSYLKLYTT 395          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_ASPTN (Eukaryotic translation initiation factor 3 subunit L OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_04476 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.003e-23
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + +    Y+ I KKN+QMYAL+AIC++L P    +++T++S LREKYGE++ R+Q    EA  +++ELF  ACPKFI+P+ P F+ P VN   D       +F+ EVK       +RS+LK+Y++
Sbjct:  271 RTKNFQKGGNSYDAIAKKNDQMYALIAICVALHP--TRLDDTIHSALREKYGEQLNRLQHGGPEALPLFEELFRSACPKFISPTPPDFDNPSVNI--DPVDHHTAIFMDEVKNTLYNPTIRSYLKLYTT 395          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_ASPOR (Eukaryotic translation initiation factor 3 subunit L OS=Aspergillus oryzae GN=AO090011000599 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.003e-23
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + +    Y+ I KKN+QMYAL+AIC++L P    +++T++S LREKYGE++ R+Q    EA  +++ELF  ACPKFI+P+ P F+ P VN   D       +F+ EVK       +RS+LK+Y++
Sbjct:  271 RTKNFQKGGNSYDAIAKKNDQMYALIAICVALHP--TRLDDTIHSALREKYGEQLHRLQHGGPEALPLFEELFRSACPKFISPTPPDFDNPSVNV--DPVDHHTAIFMDEVKNTLYNPTIRSYLKLYTT 395          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_ASPFU (Eukaryotic translation initiation factor 3 subunit L OS=Aspergillus fumigatus GN=AFUA_2G10380 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.003e-23
Identity = 53/129 (41.09%), Postives = 85/129 (65.89%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + +    Y+ I KKN+QMYAL+AIC++L P    +++T++S LREKYGE+++R+Q    +A  +++ELF  ACPKFI+P+ P F+ P +N   D       +F+ EVK       +RS+LK+Y++
Sbjct:  271 RTKNFQKGGNSYDAIAKKNDQMYALIAICVALHP--TRLDDTIHSALREKYGEQLLRLQHGGPDALPLFEELFRSACPKFISPTPPDFDNPALNI--DPVDHHTAIFMDEVKNTLYNPTIRSYLKLYTT 395          
The following BLAST results are available for this feature:
BLAST of CX309069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
EIF3L_NEUCR4.074e-2543.41Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_USTMA9.075e-2542.65Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_ASPCL1.185e-2443.41Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_SCLS14.504e-2441.86Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_BOTFB4.504e-2441.86Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_ASPNC7.683e-2442.64Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_NEOFI1.003e-2341.09Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_ASPTN1.003e-2342.64Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_ASPOR1.003e-2342.64Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_ASPFU1.003e-2341.09Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionC21008B05Rv AbsLeaSub1 Citrus clementina cDNA clone C21008B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309069 ID=CX309069; Name=CX309069; organism=Citrus clementina; type=EST; length=394bp
AGTGATGAATACACTTTCAAGAAAGATCGGACTCCTGATAATAATTGTTG
CTGCTTCACCTCATAAAGGAAAAGCTTCAACTGGAGTCTATAGGCATCCT
GGTTGTAATTTACAAGAGGCTCCTCAAAGCTCGGAGCAGAGGGAGTAATG
AACTTAGGACATGCATACGAGAAGAGCTCATCATAGATAGAAAATGCTTC
ATCATCATATCTTTGCATCCGAATCATCTTCTCCCCATATTTCTCCCGTA
GTTGCGAGTTCACAGTCTCCTCAACATGCTTCACTTAGGGACAAAGAGAA
AGACAAATTGCCAGCAAGGCATACATCTGCTCATTCTTCTTTAGTATCTG
CTCATACTGTGGAGATTTCTGATGGTATTGCTTGGTCTTGTATA
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