CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_HELAH (Serine hydroxymethyltransferase OS=Helicobacter acinonychis (strain Sheeba) GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 84/206 (40.78%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL P D+I+G+D GGHL+HG KVS ++SF Y V GYIDY + + A +P+I++CG S+YPRE D+ +FR+IAD+ GA+L+ D+AH++GL+ A E A PF +C +V+STTHK+L + PR G+ L + + + +I+ A+ P QGGP + IAA A+ K+ P Sbjct: 98 ANNAVYHALLKPYDKILGMDLSCGGHLTHG------AKVSLTGKHYQSFSYGVGLD-GYIDYGETLKIAQSVKPQIIVCGFSAYPREIDFKKFREIADEVGALLLGDIAHVAGLVVASEHAHPFPHCHVVSSTTHKTL-------------RGPR-GGLILTNDE-----EIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJE (Serine hydroxymethyltransferase OS=Campylobacter jejuni GN=glyA PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 84/201 (41.79%), Postives = 117/201 (58.21%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALK 604 AN VY L+ PGD+I+G+D GGHL+HG KVS++ +ES Y V G IDYEK+ E A +PK+++CG S+Y R D+ +FR+IAD+ GA L D+AHI+GL+ A E SPF Y +V+STTHK+L + PR I N + + ++IN A+ P +QGGP + IAA A+ K Sbjct: 96 ANQGVYAALINPGDKILGMDLSHGGHLTHG------AKVSSSGKMYESCFYGVELD-GRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTL-------------RGPRGGIIMTN------DEELAKKINSAIFPGIQGGPLMHVIAAKAVGFK 270
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA2_SULDN (Serine hydroxymethyltransferase 2 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=glyA2 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 83/206 (40.29%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL GD+++G+D GGHL+HG K S + + SF Y V G +DY+K+ E A +PKI++CG S+Y RE D+ +FR+IAD GA L D+AH++GL+AA E SPF + +VT+TTHK+L + PR I + + + ++IN A+ P +QGGP + IAA A+A K++ P Sbjct: 102 ANAAVYAALLKAGDKLLGMDLSHGGHLTHG------SKPSFSGQNYSSFTYGVEAD-GRMDYDKILEIAKAVQPKIIVCGASAYAREIDFKKFREIADAVGAFLFADIAHVAGLVAADEHMSPFPHAHVVTTTTHKTL-------------RGPRGGMIMTD------DEEIAKKINSAIFPGIQGGPLVHVIAAKAVAFKEILDP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA2_RALEJ (Serine hydroxymethyltransferase 2 OS=Ralstonia eutropha (strain JMP134) GN=glyA2 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 82/205 (40.00%), Postives = 119/205 (58.05%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN +V L PGD ++G+ +GGHL+HG K + + +F + Y VN ++ IDY+++E A +++P ++I G S+YPR+ D+ RFR IAD GA LM DMAHI+G+IAA ++P DY +VTSTTHK+L + PR + NH + ++IN AV P LQGGP + IAA A+A + T Sbjct: 105 ANGSVMLALTKPGDTVLGMSLDAGGHLTHG------AKPALSGKWFNAVQYGVNRESMLIDYDQVEALAKEHKPSLIIAGFSAYPRQLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHSNPVDYAHVVTSTTHKTL-------------RGPRGGFVLTNH------EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEAMT 284
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SYNWW (Serine hydroxymethyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=glyA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.244e-33 Identity = 85/206 (41.26%), Postives = 116/206 (56.31%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY L PG IMG++ GGHL+HG KV+ + +F Y VN T IDYE+L E A+ RP++++ G S+YPR D+ +FR+IAD+ GA+L DMAHI+GL+AA SP Y D V+STTHK+L + PR G ++ +I+ AV P +QGGP + IAA A+ K+ TP Sbjct: 101 ANTAVYFAALQPGQTIMGMNLNHGGHLTHG------SKVNISGKYFNIVDYGVNRDTERIDYEELREIALKARPQMIVAGASAYPRILDFKKFREIADEAGALLFVDMAHIAGLVAAGLHPSPVPYADFVSSTTHKTL-------------RGPR-------GGFILCRQEWANKIDKAVFPGIQGGPLMHVIAAKAVCFKEALTP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SACD2 (Serine hydroxymethyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=glyA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.244e-33 Identity = 82/205 (40.00%), Postives = 118/205 (57.56%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN AVY L PGD ++G+ GGHL+HG VS + + + Y +NP TG +DYE++ A +++PK+++ G S+Y + D+ +FR IAD+ GA LM DMAH++GL+AA SP D+ TSTTHK+L + PR GI L +N + E+++N AV P QGGP + IAA AI+ K+ T Sbjct: 101 ANSAVYAALCSPGDTVLGMSLAHGGHLTHG------ASVSFSGKMYNAVQYGINPDTGLVDYEEIANLAREHKPKMIVAGFSAYSQVLDWQKFRDIADEVGAYLMVDMAHVAGLVAAGVYPSPVQIADVTTSTTHKTL-------------RGPR-GGIIL----AKANPEIEKKLNSAVFPGGQGGPLMHVIAAKAISFKEAMT 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PSYIN (Serine hydroxymethyltransferase OS=Psychromonas ingrahamii (strain 37) GN=glyA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.244e-33 Identity = 80/206 (38.83%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY L PGD I+G+ GGHL+HG H VS + + + Y + P+TG +DY ++E A++++P ++I G S+Y D+ +FR+IADK GA L DMAH++GL+AA +P + D+VT+TTHK+L + G+ L +N E+++N AV P QGGP + IAA A+A K+ A P Sbjct: 101 ANAAVYQALCAPGDTILGMSLAHGGHLTHGSH------VSFSGKMYNAVQYGITPETGILDYAEIERLAVEHKPTMIIAGFSAYSGIVDWAKFREIADKVGAYLFVDMAHVAGLVAAGLYPNPVPFADVVTTTTHKTLGGP--------------RGGLIL----AKANEAIEKKLNSAVFPGQQGGPLMHVIAAKAVAFKECAEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_MARMS (Serine hydroxymethyltransferase OS=Marinomonas sp. (strain MWYL1) GN=glyA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.244e-33 Identity = 85/206 (41.26%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV LL PGD IMG+ SGGHL+HG K +F + Y+V+P+T IDY+ +E +A++ +PK++I GGS+ PR+ D+ RFR+IADK GA L DMAHI+GL+A SP + +VT+TTHK+L + PR I N + D ++IN AV P QGGP + IA A+A + P Sbjct: 105 ANGAVMLALLQPGDTIMGMSLSSGGHLTHGAAPAQSGK------WFNAVQYEVSPETLLIDYDAIEAQALECKPKMIIAGGSAIPRQIDFKRFREIADKVGAYLFVDMAHIAGLVATGVHPSPLPHAHVVTTTTHKTL-------------RGPRGGMILSN------DLDLGKKINSAVFPGYQGGPLMHVIAGKAVAFGEALKP 285
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_MARAV (Serine hydroxymethyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=glyA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.244e-33 Identity = 79/202 (39.11%), Postives = 119/202 (58.91%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 AN AV+ LL PGD ++G+ GGHL+HG V+ + + + Y +NP+TG IDY+++E A++++PK++I G S+Y +E D+ RFR IADK GA L DMAH++GL+AA P + +V +TTHK+L + PR G+ L C + D ++++N AV P QGGP + IAA A+ K+ Sbjct: 101 ANSAVFMALLKPGDTVLGMSLAHGGHLTHG------ASVNFSGKIYSAVQYGLNPETGLIDYDEVEALAVEHKPKMIIAGFSAYSQELDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPDPVPHAHVVATTTHKTL-------------RGPR-GGLIL----ACDDEDLQKKLNSAVFPGGQGGPLMHVIAAKAVCFKE 278
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CHLTE (Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.244e-33 Identity = 82/206 (39.81%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV +L PGD IMGLD GGHL+HG KV+ + FF++ Y V+ +TG ID K+EE A +PK++I G S+Y + +D+ FR++ADK GA+LM D+AH +GL+AA A+P +C VT+TTHK+L + G+ +N +G E I+ V P +QGGP + IA A+A + P Sbjct: 99 ANMAVLFAVLKPGDAIMGLDLSHGGHLTHG------SKVNFSGQFFDAHSYGVDKETGIIDMNKVEEMARRVKPKLIITGASAYSQGFDFKAFREVADKVGALLMADIAHPAGLVAAGLSANPMPHCHFVTTTTHKTLRGPRGGMIMMGKDFE-NPLGLTINTKNGSRVKMMSEVIDAEVMPGIQGGPLMHIIAGKAVAFGEALQP 297 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |