CX309116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309116 vs. ExPASy Swiss-Prot
Match: HBL_HORVU (Non-symbiotic hemoglobin OS=Hordeum vulgare GN=HB PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 4.969e-46 Identity = 87/120 (72.50%), Postives = 107/120 (89.17%), Query Frame = -2 Query: 1 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEA 360 F+EE+EALV+KSW +MKK++ LGL+FFL+IFEIAPSA+++F FLRDS+VPLE N KLK HA+SVFVMTCE+A QLRKAGK+TVRE+TLK+LG H KYGV + HFEVT+F+LLETIKEA Sbjct: 10 FSEEKEALVLKSWAIMKKDSANLGLRFFLKIFEIAPSARQMFPFLRDSDVPLETNPKLKTHAVSVFVMTCEAAAQLRKAGKITVRETTLKRLGGTHLKYGVADGHFEVTRFALLETIKEA 129
BLAST of CX309116 vs. ExPASy Swiss-Prot
Match: HBL1_ORYSJ (Non-symbiotic hemoglobin 1 OS=Oryza sativa subsp. japonica GN=HB1 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 9.372e-45 Identity = 84/120 (70.00%), Postives = 107/120 (89.17%), Query Frame = -2 Query: 4 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 363 +F+EEQEALV+KSW ++KK++ + L+FFL+IFE+APSA ++FSFLR+S+VPLE+N KLK HAMSVFVMTCE+A QLRKAGKVTVR++TLK+LGA H KYGV + HFEV KF+LL+TIKE Sbjct: 13 SFSEEQEALVLKSWAILKKDSANIALRFFLKIFEVAPSASQMFSFLRNSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHLKYGVGDAHFEVVKFALLDTIKE 132
BLAST of CX309116 vs. ExPASy Swiss-Prot
Match: HBL3_ORYSJ (Non-symbiotic hemoglobin 3 OS=Oryza sativa subsp. japonica GN=HB3 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.036e-43 Identity = 83/120 (69.17%), Postives = 106/120 (88.33%), Query Frame = -2 Query: 1 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEA 360 FTEEQEALV+KSW +MK ++ +G +FFL+IFE+APSA++LFSFLR+S+VPLE+N KLK HAM+VFVMTCE+A QLRK G+VTVR++T+K+LG+ HFK GV + HFEV KF+LLETIKEA Sbjct: 16 FTEEQEALVLKSWAIMKNDSAHIGHRFFLKIFEVAPSARQLFSFLRNSDVPLEKNPKLKIHAMAVFVMTCEAAAQLRKTGRVTVRDTTIKRLGSTHFKNGVSDAHFEVAKFALLETIKEA 135
BLAST of CX309116 vs. ExPASy Swiss-Prot
Match: HBL4_ORYSJ (Non-symbiotic hemoglobin 4 OS=Oryza sativa subsp. japonica GN=HB4 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 7.426e-42 Identity = 79/119 (66.39%), Postives = 103/119 (86.55%), Query Frame = -2 Query: 4 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 360 FTEEQEALV+KSW +MK ++ +G +FFL+IFE+APSA+ LFSFLR+S+VPLE+N LK HAM+VFVMTCE+A QLRK G+VTVR++T+K+LG+ HFK GV + HFEV +F+LLETIK+ Sbjct: 13 FTEEQEALVLKSWAIMKDDSANIGHRFFLKIFEVAPSARHLFSFLRNSDVPLEKNPNLKKHAMAVFVMTCEAAAQLRKTGRVTVRDTTIKRLGSTHFKNGVSDTHFEVARFALLETIKD 131
BLAST of CX309116 vs. ExPASy Swiss-Prot
Match: HBL2_ARATH (Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana GN=AHB2 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 9.098e-32 Identity = 66/119 (55.46%), Postives = 90/119 (75.63%), Query Frame = -2 Query: 4 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 360 FTE+QEALV +SW ++K++ + L FF +I EIAP+A+ LFSFLRDS+ N KLK HA+ VF MTCE+A+QLR+ GKV V ++TL+ LG++H K GV++ HFEV K +LL T+KE Sbjct: 6 FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKAHAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKE 124
BLAST of CX309116 vs. ExPASy Swiss-Prot
Match: HBL2_BRANA (Non-symbiotic hemoglobin 2 OS=Brassica napus GN=HB2 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.552e-31 Identity = 65/119 (54.62%), Postives = 91/119 (76.47%), Query Frame = -2 Query: 4 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKE 360 FTE+QEALV +SW ++K++ + L FF +I EIAP+A+ +FSFLRD++ N KLK HA+ VF MTCE+A+QLR+ GKV V ++TL+ LG+VHFK GV++ HFEV K +L+ T+KE Sbjct: 6 FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKDMFSFLRDTDEVPHNNPKLKAHAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSVHFKSGVLDPHFEVVKEALVRTLKE 124
BLAST of CX309116 vs. ExPASy Swiss-Prot
Match: HBL2_SOLLC (Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum GN=HB2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.716e-30 Identity = 66/120 (55.00%), Postives = 88/120 (73.33%), Query Frame = -2 Query: 1 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEA 360 FT++QEALV SW MK++ +L L+FF I EIAP A+ +FSFL+DS+ E N KL+ HA+ VF MTCESA+QLR+ G+V V E+TLK LG++H + V + HFEV K +LL T+KEA Sbjct: 3 FTDKQEALVRDSWEFMKQDIPQLSLRFFSLILEIAPVAKNMFSFLKDSDELPENNPKLRAHAVKVFKMTCESAIQLREKGEVVVGETTLKYLGSIHLQKRVADPHFEVVKEALLRTVKEA 122
BLAST of CX309116 vs. ExPASy Swiss-Prot
Match: HBL2_GOSHI (Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum GN=HB2 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.716e-30 Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = -2 Query: 1 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEA 360 FTE+QE LV +SW V+K++ L+FF I EIAP A+ +FSFLR+S + N KLK HA+ VF MTCESA+QLR+ G+V V ++TLK LG VH K GV + HFEV K +LL TI+EA Sbjct: 3 FTEKQEGLVKESWEVLKQDIPHSSLRFFSLILEIAPGAKNMFSFLRESEEIPQNNPKLKAHAVKVFKMTCESAIQLREKGEVVVADTTLKYLGTVHVKSGVKDPHFEVVKEALLRTIEEA 122
BLAST of CX309116 vs. ExPASy Swiss-Prot
Match: HBL0_PHYPA (Non-symbiotic hemoglobin 0 OS=Physcomitrella patens GN=GLB0 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.374e-26 Identity = 55/120 (45.83%), Postives = 83/120 (69.17%), Query Frame = -2 Query: 7 RAFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIK 366 + +++E E LV +SW ++KK+A G+ FF ++FEIAP A+ ++SFLRDS +P E+N K+K HA VF+MT ++AVQL + G V ES L+KL A H GV ++ FE+ K ++L I+ Sbjct: 22 KTYSKENEQLVKQSWEILKKDAQRNGINFFRKVFEIAPGAKAMYSFLRDSTIPFEENPKVKNHARYVFMMTGDAAVQLGEKGAYQVLESKLQKLAATHVNAGVTDDQFEIVKEAILYAIE 141
BLAST of CX309116 vs. ExPASy Swiss-Prot
Match: HBPA_CASGL (Hemoglobin A OS=Casuarina glauca GN=SYMA PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 2.171e-25 Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = -2 Query: 1 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEA 363 A TE QEAL+ +SW V+K+N L+ F I E AP ++ +FSFL+DSN E N KLK HA +F CESA +LR+ G+ +TLK+LG++H K + + HFEV K +LL TIKEA Sbjct: 2 ALTERQEALLKQSWEVLKQNIPGHSLRLFALIIEAAPESKYVFSFLKDSNEIPENNPKLKAHAAVIFKTICESATELRQKGQAVWDNNTLKRLGSIHLKNKITDPHFEVMKGALLGTIKEA 122 The following BLAST results are available for this feature:
BLAST of CX309116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX309116 ID=CX309116; Name=CX309116; organism=Citrus clementina; type=EST; length=445bpback to top |