CX309122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.697e-19 Identity = 41/75 (54.67%), Postives = 58/75 (77.33%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDE-DGFLYMTYSGENTFG 224 E++K+KYLVP ++ VGQF++++R R+ LSP A+F+FV N LP TA +M ++YE +DE DGFLY+ YS E TFG Sbjct: 44 EMEKRKYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8L_DICDI (Autophagy-related protein 8-like protein DDB_G0290491 OS=Dictyostelium discoideum GN=DDB_G0290491 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.525e-16 Identity = 39/78 (50.00%), Postives = 60/78 (76.92%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSP---EKAIFIFV-KNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +I+KKK+L P+++ + F+ +RK + S +KAIF+FV KN LPP++ ++S+IY+ ++DEDGFLY+ YSGENTFG Sbjct: 46 DINKKKFLAPSNMVITNFIMEIRKHLDDSDHNEQKAIFLFVNKNNLPPSSQLLSSIYDAHKDEDGFLYICYSGENTFG 123
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: MLP3C_HUMAN (Microtubule-associated proteins 1A/1B light chain 3C OS=Homo sapiens GN=MAP1LC3C PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.566e-12 Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKN-ILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +DK K+LVP +LT+ QF+ ++R R+ L +A ++ V N L +A M+ IY + +DEDGF+YMTY+ + TFG Sbjct: 53 LDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: MLP3A_RAT (Microtubule-associated proteins 1A/1B light chain 3A OS=Rattus norvegicus GN=Map1lc3a PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.663e-11 Identity = 29/74 (39.19%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFV-KNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +DK K+LVP + + + V ++R+R++L+P +A F+ V ++ + + ++ IYE+ +DEDGFLYM Y+ + TFG Sbjct: 47 LDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: MLP3A_MOUSE (Microtubule-associated proteins 1A/1B light chain 3A OS=Mus musculus GN=Map1lc3a PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.663e-11 Identity = 29/74 (39.19%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFV-KNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +DK K+LVP + + + V ++R+R++L+P +A F+ V ++ + + ++ IYE+ +DEDGFLYM Y+ + TFG Sbjct: 47 LDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: MLP3A_HUMAN (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.663e-11 Identity = 29/74 (39.19%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFV-KNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +DK K+LVP + + + V ++R+R++L+P +A F+ V ++ + + ++ IYE+ +DEDGFLYM Y+ + TFG Sbjct: 47 LDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: MLP3A_BOVIN (Microtubule-associated proteins 1A/1B light chain 3A OS=Bos taurus GN=MAP1LC3A PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.663e-11 Identity = 29/74 (39.19%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFV-KNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +DK K+LVP + + + V ++R+R++L+P +A F+ V ++ + + ++ IYE+ +DEDGFLYM Y+ + TFG Sbjct: 47 LDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: MLP3B_RAT (Microtubule-associated proteins 1A/1B light chain 3B OS=Rattus norvegicus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 66.2402 bits (160), Expect = 6.320e-11 Identity = 28/74 (37.84%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVK-NILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +DK K+LVP + + + + ++R+R++L+ +A F+ V + + + +S +YE RDEDGFLYM Y+ + TFG Sbjct: 47 LDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG 120
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: MLP3B_MOUSE (Microtubule-associated proteins 1A/1B light chain 3B OS=Mus musculus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 66.2402 bits (160), Expect = 6.320e-11 Identity = 28/74 (37.84%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVK-NILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +DK K+LVP + + + + ++R+R++L+ +A F+ V + + + +S +YE RDEDGFLYM Y+ + TFG Sbjct: 47 LDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG 120
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: MLP3B_HUMAN (Microtubule-associated proteins 1A/1B light chain 3B OS=Homo sapiens GN=MAP1LC3B PE=1 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 8.254e-11 Identity = 29/79 (36.71%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVK-NILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF*SV 239 +DK K+LVP + + + + ++R+R++L+ +A F+ V + + + +S +YE +DEDGFLYM Y+ + TFG+ SV Sbjct: 47 LDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFGMKLSV 125 The following BLAST results are available for this feature:
BLAST of CX309122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309122 ID=CX309122; Name=CX309122; organism=Citrus clementina; type=EST; length=435bpback to top |