CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL17_ARATH (Beta-glucosidase 17 OS=Arabidopsis thaliana GN=BGLU17 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 5.478e-41
Identity = 78/146 (53.42%), Postives = 98/146 (67.12%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            VN  GIN YN LI+ L+  GI+P VTL  +D+PQ +ED+YG +L+P+  +DF  + DICFK FGDRVK W TINEPNM   L Y +G   P  CS    NC+ GNS  EP++ AH LILSHA  V +YR KYQ   GG+IG+ + T
Sbjct:  130 VNQAGINFYNHLINELISNGIRPLVTLFHWDTPQALEDEYGGFLNPQIVKDFVEYVDICFKEFGDRVKEWITINEPNMFAVLGYNVGNIAPGRCSSYVQNCTVGNSATEPYLVAHYLILSHAATVQLYREKYQSFHGGTIGMTIQT 275          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL40_ARATH (Beta-glucosidase 40 OS=Arabidopsis thaliana GN=BGLU40 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 4.638e-40
Identity = 74/143 (51.75%), Postives = 98/143 (68.53%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            +N  GI+HYNKLI+ALL KGI+P+VTL  +D PQ + D+Y  WL+P+   DF  +A++CF+ FGDRVK+W T NEP+      Y +G   P  C+  F   C +GNS  EP+I  HN+IL+HAT  DIYR KY+  QGGS+GI
Sbjct:  124 INEAGIDHYNKLINALLAKGIEPYVTLYHWDLPQALHDRYLGWLNPQIINDFAAYAEVCFQRFGDRVKHWITFNEPHTFAIQGYDVGLQAPGRCTILFKLTCREGNSSTEPYIVGHNVILTHATVSDIYRKKYKAKQGGSLGI 266          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL34_ORYSJ (Beta-glucosidase 34 OS=Oryza sativa subsp. japonica GN=BGLU34 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 4.638e-40
Identity = 76/144 (52.78%), Postives = 97/144 (67.36%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            +VN  GI+HYNKLI+ALL KGI+P+VTL  +D PQ +EDKY  WL  +   D+  +A+ CF++FGDRVK+W T NEP+     +Y  G H P  CS      C +GNS  EP+I AHN+ILSHAT  DIYR KY+  Q G +GI
Sbjct:  124 EVNQAGIDHYNKLINALLAKGIEPYVTLYHWDLPQALEDKYTGWLDRQIINDYAVYAETCFQAFGDRVKHWITFNEPHTVAVQAYDSGMHAPGRCSVLLHLYCKKGNSGTEPYIVAHNMILSHATVSDIYRKKYKASQNGELGI 267          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL06_ORYSJ (Beta-glucosidase 6 OS=Oryza sativa subsp. japonica GN=BGLU6 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 5.128e-39
Identity = 75/143 (52.45%), Postives = 93/143 (65.03%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            VN  GI+HYNKLIDALL KGIQP+VTL  +D PQ +EDKY  WL  +  +DF  +A+ CF+ FGDRVK+W T+NEP+      Y  G   P  CS      C  GNS  EP++ AH+ IL+HA A  IYRTKY+  Q G +GI
Sbjct:  137 VNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGI 279          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL02_ORYSJ (Beta-glucosidase 2 OS=Oryza sativa subsp. japonica GN=BGLU2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.948e-38
Identity = 73/144 (50.69%), Postives = 93/144 (64.58%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG--NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            VN EG+ +YN +ID L  +GIQP + L   D PQ +ED+Y  WLSP   +DF  +AD+CF+ FGDRV +W T+ EPN+     Y  G   P HCS PFG   C+ GNS  EP+I AHN+IL+HA  V +YR KYQ  Q G +GI
Sbjct:  116 VNQEGLKYYNNVIDELAKRGIQPHIMLCHLDLPQALEDEYDGWLSPRIVDDFTAYADVCFREFGDRVLHWTTLAEPNIAALGGYDTGVLSPGHCSDPFGLTECTVGNSTVEPYITAHNMILTHAAVVRLYREKYQALQKGIVGI 259          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL11_ARATH (Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGLU11 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 4.341e-38
Identity = 72/134 (53.73%), Postives = 93/134 (69.40%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQ 428
            +N +G+ +YN LID L+  GIQP VTL  FD PQ +ED+YG WLS E   DF  +AD CFK FGDRV +W TINE N+     Y  G  PPA CS PFG NC++GNS  EP+IA HN++L+HA+A  +Y+ +Y+
Sbjct:  116 INPKGLQYYNNLIDELITHGIQPHVTLHHFDLPQALEDEYGGWLSQEIVRDFTAYADTCFKEFGDRVSHWTTINEVNVFALGGYDQGITPPARCSPPFGLNCTKGNSSIEPYIAVHNMLLAHASATILYKQQYK 249          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL22_ORYSJ (Beta-glucosidase 22 OS=Oryza sativa subsp. japonica GN=BGLU22 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 5.669e-38
Identity = 71/143 (49.65%), Postives = 97/143 (67.83%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            VN +G+ +YN LID L+ +GI+  VTL   D PQ +ED+Y  WLSP   +DF  +AD+CF+ FGDRV++W T++EPN+    +Y  G  PP  CS PFG NC+ GNS  EP++ AHN IL+HA+   +YR KYQ  Q G +G+
Sbjct:  133 VNPKGLEYYNSLIDELVERGIEIHVTLYHLDFPQILEDEYHGWLSPRVIDDFTAYADVCFREFGDRVRHWTTMDEPNVLSIAAYDSGAFPPCRCSPPFGANCTAGNSTVEPYVVAHNSILAHASVTRLYRDKYQATQEGFVGM 275          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL05_ORYSJ (Beta-glucosidase 5 OS=Oryza sativa subsp. japonica GN=BGLU5 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 7.404e-38
Identity = 75/149 (50.34%), Postives = 96/149 (64.43%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG--NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            DVN +G+ +YN +ID L+  GIQ  + L Q D PQ +ED+Y  WLSP   EDF  +AD+CFK FGDRV +W TI+EPN+    SY  G   P  CS PFG   C+ GNS  EP+IA HN++L+HA+   +YR KYQ    G IGI + T
Sbjct:  117 DVNPKGLQYYNDIIDGLVKNGIQVHIMLYQLDLPQVLEDEYDGWLSPRILEDFKAYADVCFKEFGDRVAHWITIDEPNVASIGSYDSGQLAPGRCSDPFGIRKCTVGNSSVEPYIAVHNMLLAHASVTKLYREKYQVAGKGIIGISVYT 265          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL12_ARATH (Beta-glucosidase 12 OS=Arabidopsis thaliana GN=BGLU12 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 9.670e-38
Identity = 74/146 (50.68%), Postives = 95/146 (65.07%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ-PFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            +N  GI++YN LI+ LL KGI+PF T+  +D+PQ +ED YG +L  E   DF  +ADICFK+FGDRVK+W T+NEP   V   Y  G   P  CS+    NC+ GN   EP+I  HNLIL+H  AV +YR KY+  Q G +GI LN
Sbjct:  126 INQAGIDYYNNLINELLSKGIKPFATIFHWDTPQSLEDAYGGFLGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSKFTNPNCTAGNGATEPYIVGHNLILAHGEAVKVYREKYKASQKGQVGIALN 271          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL15_ARATH (Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGLU15 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.263e-37
Identity = 74/146 (50.68%), Postives = 94/146 (64.38%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ-PFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            +N  GI++YN LI+ LL KGI+PF T+  +D+PQ +ED YG +   E   DF  +ADICFK+FGDRVK+W T+NEP   V   Y  G   P  CS+    NC+ GN   EP+I  HNLILSH  AV +YR KY+  Q G +GI LN
Sbjct:  126 INQAGIDYYNNLINELLSKGIKPFATMFHWDTPQALEDAYGGFRGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSKFTNPNCTDGNGATEPYIVGHNLILSHGAAVQVYREKYKASQQGQVGIALN 271          
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
BGL17_ARATH5.478e-4153.42Beta-glucosidase 17 OS=Arabidopsis thaliana GN=BGL... [more]
BGL40_ARATH4.638e-4051.75Beta-glucosidase 40 OS=Arabidopsis thaliana GN=BGL... [more]
BGL34_ORYSJ4.638e-4052.78Beta-glucosidase 34 OS=Oryza sativa subsp. japonic... [more]
BGL06_ORYSJ5.128e-3952.45Beta-glucosidase 6 OS=Oryza sativa subsp. japonica... [more]
BGL02_ORYSJ1.948e-3850.69Beta-glucosidase 2 OS=Oryza sativa subsp. japonica... [more]
BGL11_ARATH4.341e-3853.73Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGL... [more]
BGL22_ORYSJ5.669e-3849.65Beta-glucosidase 22 OS=Oryza sativa subsp. japonic... [more]
BGL05_ORYSJ7.404e-3850.34Beta-glucosidase 5 OS=Oryza sativa subsp. japonica... [more]
BGL12_ARATH9.670e-3850.68Beta-glucosidase 12 OS=Arabidopsis thaliana GN=BGL... [more]
BGL15_ARATH1.263e-3750.68Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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