CX309298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAEQ (6-phospho-beta-galactosidase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=lacG PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.312e-13 Identity = 47/144 (32.64%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGII 458 +VN +G+ +Y+ L + ++PFVTL FD+P E+ K G +L+ ++ + F +A+ CFK F + VKYW T NE Y +G PP F E+ F + HN++++HA AV +++ + K G IG++ Sbjct: 87 EVNQKGVEYYHNLFKECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEFCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLFKDENYK---GEIGVV 215
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAAW (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain MW2) GN=lacG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3 Query: 27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458 +VN +G+ +Y+KL + ++PFVTL FD+P E+ K G +L+ ++ + F +A+ CFK F + VKYW T NE Y +G PP F E+ F + HN++++HA AV ++ KD G G IG++ Sbjct: 87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLF-----KDGGYQGEIGVV 215
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAAU (6-phospho-beta-galactosidase OS=Staphylococcus aureus GN=lacG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGII 458 +VN +G+ +Y+KL + ++PFVTL FD+P E+ K G +L+ ++ + F +A+ CFK F + VKYW T NE Y +G PP F E+ F + HN++++HA AV +++ K G IG++ Sbjct: 87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLFKDGGYK---GEIGVV 215
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAAT (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=lacG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGII 458 +VN +G+ +Y+KL + ++PFVTL FD+P E+ K G +L+ ++ + F +A+ CFK F + VKYW T NE Y +G PP F E+ F + HN++++HA AV +++ K G IG++ Sbjct: 87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLFKDGGYK---GEIGVV 215
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAAS (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain MSSA476) GN=lacG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3 Query: 27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458 +VN +G+ +Y+KL + ++PFVTL FD+P E+ K G +L+ ++ + F +A+ CFK F + VKYW T NE Y +G PP F E+ F + HN++++HA AV ++ KD G G IG++ Sbjct: 87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLF-----KDGGYQGEIGVV 215
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAAR (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain MRSA252) GN=lacG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3 Query: 27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458 +VN +G+ +Y+KL + ++PFVTL FD+P E+ K G +L+ ++ + F +A+ CFK F + VKYW T NE Y +G PP F E+ F + HN++++HA AV ++ KD G G IG++ Sbjct: 87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLF-----KDGGYQGEIGVV 215
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAAN (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain N315) GN=lacG PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3 Query: 27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458 +VN +G+ +Y+KL + ++PFVTL FD+P E+ K G +L+ ++ + F +A+ CFK F + VKYW T NE Y +G PP F E+ F + HN++++HA AV ++ KD G G IG++ Sbjct: 87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLF-----KDGGYQGEIGVV 215
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAAM (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=lacG PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3 Query: 27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458 +VN +G+ +Y+KL + ++PFVTL FD+P E+ K G +L+ ++ + F +A+ CFK F + VKYW T NE Y +G PP F E+ F + HN++++HA AV ++ KD G G IG++ Sbjct: 87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLF-----KDGGYQGEIGVV 215
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAAE (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Newman) GN=lacG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGII 458 +VN +G+ +Y+KL + ++PFVTL FD+P E+ K G +L+ ++ + F +A+ CFK F + VKYW T NE Y +G PP F E+ F + HN++++HA AV +++ K G IG++ Sbjct: 87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLFKDGGYK---GEIGVV 215
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAAC (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain COL) GN=lacG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12 Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGII 458 +VN +G+ +Y+KL + ++PFVTL FD+P E+ K G +L+ ++ + F +A+ CFK F + VKYW T NE Y +G PP F E+ F + HN++++HA AV +++ K G IG++ Sbjct: 87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLFKDGGYK---GEIGVV 215 The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bpback to top |