CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAAB (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=lacG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3 
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458
            +VN +G+ +Y+KL      + ++PFVTL  FD+P E+  K G +L+ ++ + F  +A+ CFK F + VKYW T NE        Y +G  PP      F         E+ F + HN++++HA AV ++     KD G  G IG++
Sbjct:   87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLF-----KDGGYQGEIGVV 215
[Close]
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAA9 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain JH9) GN=lacG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3 
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458
            +VN +G+ +Y+KL      + ++PFVTL  FD+P E+  K G +L+ ++ + F  +A+ CFK F + VKYW T NE        Y +G  PP      F         E+ F + HN++++HA AV ++     KD G  G IG++
Sbjct:   87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLF-----KDGGYQGEIGVV 215
[Close]
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAA8 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain NCTC 8325) GN=lacG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 3 
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGII 458
            +VN +G+ +Y+KL      + ++PFVTL  FD+P E+  K G +L+ ++ + F  +A+ CFK F + VKYW T NE        Y +G  PP      F         E+ F + HN++++HA AV +++    K   G IG++
Sbjct:   87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLFKDGGYK---GEIGVV 215
[Close]
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAA3 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain USA300) GN=lacG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 3 
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGII 458
            +VN +G+ +Y+KL      + ++PFVTL  FD+P E+  K G +L+ ++ + F  +A+ CFK F + VKYW T NE        Y +G  PP      F         E+ F + HN++++HA AV +++    K   G IG++
Sbjct:   87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLFKDGGYK---GEIGVV 215
[Close]
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAA2 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain JH1) GN=lacG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3 
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458
            +VN +G+ +Y+KL      + ++PFVTL  FD+P E+  K G +L+ ++ + F  +A+ CFK F + VKYW T NE        Y +G  PP      F         E+ F + HN++++HA AV ++     KD G  G IG++
Sbjct:   87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLF-----KDGGYQGEIGVV 215
[Close]
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAA1 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=lacG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3 
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458
            +VN +G+ +Y+KL      + ++PFVTL  FD+P E+  K G +L+ ++ + F  +A+ CFK F + VKYW T NE        Y +G  PP      F         E+ F + HN++++HA AV ++     KD G  G IG++
Sbjct:   87 EVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP-EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPG-IKYDF---------EKVFQSHHNMMVAHARAVKLF-----KDGGYQGEIGVV 215
[Close]
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG1_STRR6 (6-phospho-beta-galactosidase 1 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=lacG1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = 3 
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAV 404
            D N   +++Y+++  + L   + PFV+L  FDSPQ++ +  G WL+ E+ + F  +A  CF+ F + VK+WFTINE        Y  G  PP H  Q            E   A HN++L+HA AV
Sbjct:   91 DANVLAVHYYHRVFQSCLKHNVIPFVSLHHFDSPQKMLET-GDWLNRENIDRFIRYARFCFQEFTE-VKHWFTINELMSLAAGQYIGGQFPPNHHFQ----------LSEAIQANHNMLLAHALAV 204
[Close]
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG1_STRPN (6-phospho-beta-galactosidase 1 OS=Streptococcus pneumoniae GN=lacG1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.077e-12
Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = 3 
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAV 404
            D N   +++Y+++  + L   + PFV+L  FDSPQ++ +  G WL+ E+ + F  +A  CF+ F + VK+WFTINE        Y  G  PP H  Q            E   A HN++L+HA AV
Sbjct:   91 DANVLAVHYYHRVFQSCLKHNVIPFVSLHHFDSPQKMLET-GDWLNRENIDRFIRYARFCFQEFTE-VKHWFTINELMSLAAGQYIGGQFPPNHHFQ----------LSEAIQANHNMLLAHALAV 204
[Close]
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STRPC (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=lacG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.406e-12
Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 3 
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458
            +VN +G+ +Y+ L      + ++PFVTL  FD+P+ +    G +L+ E+ E F  +A++CFK F + V YW T NE        Y +G  PP                 + F + HN+++SHA AV ++     KD G  G IG++
Sbjct:   87 EVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFVNYAELCFKEFSE-VNYWTTFNEIGPIGDGQYLVGKFPP----------GIQYDLAKVFQSHHNMMVSHARAVKLF-----KDSGYSGEIGVV 215
[Close]
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STRPB (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=lacG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.406e-12
Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 3 
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458
            +VN +G+ +Y+ L      + ++PFVTL  FD+P+ +    G +L+ E+ E F  +A++CFK F + V YW T NE        Y +G  PP                 + F + HN+++SHA AV ++     KD G  G IG++
Sbjct:   87 EVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFVNYAELCFKEFSE-VNYWTTFNEIGPIGDGQYLVGKFPP----------GIQYDLAKVFQSHHNMMVSHARAVKLF-----KDSGYSGEIGVV 215
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
LACG_STAAB1.077e-1234.256-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA91.077e-1234.256-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA81.077e-1233.336-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA31.077e-1233.336-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA21.077e-1234.256-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA11.077e-1234.256-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG1_STRR61.077e-1235.716-phospho-beta-galactosidase 1 OS=Streptococcus pn... [more]
LACG1_STRPN1.077e-1235.716-phospho-beta-galactosidase 1 OS=Streptococcus pn... [more]
LACG_STRPC1.406e-1232.196-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPB1.406e-1232.196-phospho-beta-galactosidase OS=Streptococcus pyog... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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