CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STRPJ (6-phospho-beta-galactosidase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=lacG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.030e-11
Identity = 46/143 (32.17%), Postives = 71/143 (49.65%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGII 458
            VN +G+  Y+ L      + ++PFVTL  FD+P+ +    G +L+ E+ E F  +A  CF+ F + V YW T NE        Y +G  PP                 + F + HN+++SHA AV +Y+ K  K   G IG++
Sbjct:   88 VNVKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFVDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPP----------GIQYDLAKVFQSHHNMMVSHARAVKLYKEKGYK---GEIGVV 215          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGLA_BACSU (Aryl-phospho-beta-D-glucosidase bglA OS=Bacillus subtilis GN=bglA PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.030e-11
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 3
Query:   33 NSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLS 278
            N  G+  Y+ + D LL  GI+P +TL+ F+ P  +  +YG + + +  + F  FA+ CF  + D+VKYW T NE N Q+ ++
Sbjct:  103 NEAGLQFYDDVFDELLKHGIEPVITLSHFEMPLHLAREYGGFRNRKVVDFFVNFAEACFTRYKDKVKYWMTFNEINNQMDVN 184          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: LACG_STAHJ (6-phospho-beta-galactosidase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=lacG PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 44/146 (30.14%), Postives = 73/146 (50.00%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG--GSIGII 458
            +VN +G+ +Y+ L      + ++PFVTL  FD+P+ +    G +L+ ++ E F  +A  CF+ F + V YW T NE        Y +G  PP      F    Q +         HN++++HA AV ++     KD G  G +G++
Sbjct:   86 EVNPKGVEYYHNLFKECHRRHVEPFVTLHHFDTPETLHSD-GDFLNRKTIEYFVEYAKFCFEEF-EEVNYWTTFNEIGPIGDGQYLVGKFPPG-IKYDFAKVFQSH---------HNMMVAHAKAVKLF-----KDNGYSGEVGVV 214          
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
LACG_STRPJ2.030e-1132.176-phospho-beta-galactosidase OS=Streptococcus pneu... [more]
BGLA_BACSU2.030e-1136.59Aryl-phospho-beta-D-glucosidase bglA OS=Bacillus s... [more]
LACG_STAHJ5.908e-1130.146-phospho-beta-galactosidase OS=Staphylococcus hae... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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