CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL14_ARATH (Beta-glucosidase 14 OS=Arabidopsis thaliana GN=BGLU14 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 1.649e-37
Identity = 73/146 (50.00%), Postives = 95/146 (65.07%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ-PFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            +N  GI++YN LI+ LL KGI+PF T+  +D+PQ++ED YG +   E   DF  +ADICFKSFGDRVK+W T+NEP   V   Y  G   P  CS+    NC+ GN   EP+I  HNLIL+H  A+ +YR KY+  Q G +GI LN
Sbjct:  125 INQAGIDYYNNLINELLSKGIKPFATIFHWDTPQDLEDAYGGFRGAEIVNDFRDYADICFKSFGDRVKHWITLNEPLTVVQQGYVAGVMAPGRCSKFTNPNCTAGNGATEPYIVGHNLILAHGEAIKVYRKKYKASQKGQVGIALN 270          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL24_ORYSJ (Beta-glucosidase 24 OS=Oryza sativa subsp. japonica GN=BGLU24 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.814e-37
Identity = 78/145 (53.79%), Postives = 94/145 (64.83%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC-SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            VN EGI +YN LID L+ KG++PFVTL  +DSPQ +E +YG +LS    EDF  +ADICF+ FGDRVKYW T NEP       Y  G   P  C SQ    CS+G+S  EP+I AHN +L+HA  V IYR KYQ  Q G IGI +
Sbjct:  123 VNLEGIKYYNNLIDELISKGVEPFVTLFHWDSPQALEQQYGGFLSNLIVEDFRDYADICFREFGDRVKYWITFNEPWSFSIGGYSNGILAPGRCSSQGKSGCSKGDSGREPYIVAHNQLLAHAAVVQIYREKYQGGQKGKIGIAI 267          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL13_ARATH (Beta-glucosidase 13 OS=Arabidopsis thaliana GN=BGLU13 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.814e-37
Identity = 73/146 (50.00%), Postives = 94/146 (64.38%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ-PFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            +N  GI++YN LI+ LL KGI+PF T+  +D+PQ +ED YG +   E   DF  +ADICFK+FGDRVK+W T+NEP   V   Y  G   P  CS+    NC+ GN   EP+I  HNLIL+H  AV +YR KY+  Q G +GI LN
Sbjct:  126 INQAGIDYYNNLINELLSKGIKPFATIFHWDTPQSLEDAYGGFFGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSKFTNPNCTAGNGATEPYIVGHNLILAHGEAVKVYREKYKASQKGQVGIALN 271          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL07_ORYSJ (Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 4.799e-37
Identity = 73/145 (50.34%), Postives = 96/145 (66.21%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN EG+ +YN LI+ LL KGI P+V L  +D P  +E KYG WL+ +  + F  +AD CFK+FG+RVK+WFT NEP +   L Y  G +PP  C++     + GNS  EP+I AHN +LSHA AV  YRTKYQ  Q G +GI+L+
Sbjct:  130 VNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTK---CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLD 271          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL11_ORYSJ (Beta-glucosidase 11 OS=Oryza sativa subsp. japonica GN=BGLU11 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 6.268e-37
Identity = 75/146 (51.37%), Postives = 95/146 (65.07%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ-PFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN EGI++YN LI+ LL KG+QPFVTL  +DSPQ +EDKY  +LSP    D+  +A+ CFK FGDRVK+W T NEP    ++ Y  G   P  CS    G C  G+S  EP+ A H+ +L+HA  V +Y+ KYQ  Q G IGIILN
Sbjct:  129 VNREGISYYNNLINELLSKGVQPFVTLFHWDSPQALEDKYKGFLSPNIINDYKEYAETCFKEFGDRVKHWITFNEPWTFCSMGYASGIMAPGRCSSWEVGKCRVGDSGREPYTACHHQLLAHAETVRLYKEKYQALQKGKIGIILN 274          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL13_ORYSJ (Beta-glucosidase 13 OS=Oryza sativa subsp. japonica GN=BGLU13 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 8.186e-37
Identity = 75/145 (51.72%), Postives = 94/145 (64.83%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRL-GCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            +N EGI++YN LI+ LLLKG+QPFVTL  +DSPQ +EDKY  +LSP    D+  +A+ CFK FGDRVK+W T NEP       Y   G   P  CS   GNCS G+S  EP+ A H+ +L+HA  V +Y+ KYQ  Q G IGI L
Sbjct:  125 INREGISYYNNLINELLLKGVQPFVTLFHWDSPQALEDKYNGFLSPNIINDYKEYAETCFKEFGDRVKHWITFNEPLSFCVAGYASGGMFAPGRCSPWEGNCSAGDSGREPYTACHHQLLAHAETVRLYKEKYQVLQKGKIGITL 269          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL12_ORYSJ (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 8.186e-37
Identity = 76/145 (52.41%), Postives = 93/145 (64.14%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ-PFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            VN EGI +YN LI+ LL KG+QPF+TL  +DSPQ +EDKY  +LSP    DF  +A+ICFK FGDRVK W T NEP    +  Y  G   P  CS    GNCS G+S  EP+ A H+ +L+HA  V +Y+ KYQ  Q G IGI L
Sbjct:  129 VNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITL 273          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL25_ORYSJ (Beta-glucosidase 25 OS=Oryza sativa subsp. japonica GN=BGLU25 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.396e-36
Identity = 74/146 (50.68%), Postives = 94/146 (64.38%), Query Frame = 3
Query:   33 NSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCS-QPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            N EG+++YN LIDALL KGI+P+VTL  +D PQ +ED+YG WL+ E  EDF  +A  CFK FGDRVK+W T NEP       Y LG   P  CS      C +G S  EP+I AHN++L+HA A   Y   ++ +QGG IGI LN+
Sbjct:  113 NEEGLSYYNSLIDALLDKGIEPYVTLFHWDLPQALEDRYGGWLNSEIIEDFVQYAFTCFKEFGDRVKHWITFNEPYNFAIDGYDLGIQAPGRCSILSHVFCREGKSSTEPYIVAHNILLAHAGAFRAYEQHFKNEQGGLIGIALNS 258          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL03_ORYSJ (Beta-glucosidase 3 OS=Oryza sativa subsp. japonica GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.396e-36
Identity = 71/144 (49.31%), Postives = 91/144 (63.19%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG--NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            VN +G+ +YN +ID L  +GIQ  V L   D PQ +ED+Y  WLSP   EDF  +AD+CF+ FGDRV +W  + EPN+     Y  G   P  CS PFG   C+ GNS  EP++AAHN+IL+HA  V +YR KYQ  Q G +GI
Sbjct:  115 VNQQGLKYYNNIIDELTKRGIQVHVMLYHLDLPQALEDEYAGWLSPRIVEDFTAYADVCFREFGDRVSHWTILAEPNVAALGGYDTGEFAPGRCSDPFGVTKCTVGNSSVEPYVAAHNMILTHAAVVRLYREKYQTLQKGIVGI 258          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL41_ARATH (Putative beta-glucosidase 41 OS=Arabidopsis thaliana GN=BGLU41 PE=3 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 2.382e-36
Identity = 73/148 (49.32%), Postives = 97/148 (65.54%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGN--CSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            +VN +G+ +YN LIDALL KGI+P+VTL  +D PQ +ED+Y  WLS E  +DF ++A  CFK+FGDRVKYW T NEP+      Y  G   P  CS   G+  C +G S  EP+I AHN++LSHA A   Y+  +++ Q G IGI L+
Sbjct:  122 EVNPDGVKYYNSLIDALLAKGIKPYVTLYHWDLPQALEDRYEGWLSREVVDDFEHYAFTCFKAFGDRVKYWITFNEPHGVSIQGYDTGIQAPGRCSL-LGHWFCKKGKSSVEPYIVAHNILLSHAAAYHTYQRNFKEKQRGQIGISLD 268          
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
BGL14_ARATH1.649e-3750.00Beta-glucosidase 14 OS=Arabidopsis thaliana GN=BGL... [more]
BGL24_ORYSJ2.814e-3753.79Beta-glucosidase 24 OS=Oryza sativa subsp. japonic... [more]
BGL13_ARATH2.814e-3750.00Beta-glucosidase 13 OS=Arabidopsis thaliana GN=BGL... [more]
BGL07_ORYSJ4.799e-3750.34Beta-glucosidase 7 OS=Oryza sativa subsp. japonica... [more]
BGL11_ORYSJ6.268e-3751.37Beta-glucosidase 11 OS=Oryza sativa subsp. japonic... [more]
BGL13_ORYSJ8.186e-3751.72Beta-glucosidase 13 OS=Oryza sativa subsp. japonic... [more]
BGL12_ORYSJ8.186e-3752.41Beta-glucosidase 12 OS=Oryza sativa subsp. japonic... [more]
BGL25_ORYSJ1.396e-3650.68Beta-glucosidase 25 OS=Oryza sativa subsp. japonic... [more]
BGL03_ORYSJ1.396e-3649.31Beta-glucosidase 3 OS=Oryza sativa subsp. japonica... [more]
BGL41_ARATH2.382e-3649.32Putative beta-glucosidase 41 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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