CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL26_ORYSJ (Beta-glucosidase 26 OS=Oryza sativa subsp. japonica GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.382e-36
Identity = 74/145 (51.03%), Postives = 95/145 (65.52%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN EG+++YN+LID ++ KGI+P+  L  +D P  + ++Y  WLSP   E F  +AD CF++FGDRVK WFT NEP     L Y  G H P  CS   G  + GNS  EP++AAH+LILSHA AV  YR KYQ  Q G IGI+L+
Sbjct:  132 VNQEGVDYYNRLIDYMVKKGIKPYANLYHYDLPLALHEQYLGWLSPNIVEAFADYADFCFQTFGDRVKDWFTFNEPRCVAALGYDNGFHAPGRCS---GCDAGGNSTTEPYLAAHHLILSHAAAVKRYREKYQLYQKGRIGILLD 273          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL04_ARATH (Beta-glucosidase 4 OS=Arabidopsis thaliana GN=BGLU4 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 5.306e-36
Identity = 70/144 (48.61%), Postives = 91/144 (63.19%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            VN +G+  Y  LI  L+  GI+P VTL  +D PQ +ED+YG WL+    +DF  +AD+CF+ FG+ VK W TINE N+     Y  G  PP  CS+P  NCS GNS  EP+I  HNL+L+HA+    Y+ KY+  QGGSIG  L
Sbjct:  112 VNQKGLQFYKNLIQELVSHGIEPHVTLYHYDHPQSLEDEYGGWLNHRMIKDFTTYADVCFREFGNHVKLWTTINEANIFSIGGYNDGDTPPGRCSKPSKNCSSGNSSIEPYIVGHNLLLAHASVSRRYKQKYKDKQGGSIGFSL 255          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL44_ARATH (Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGLU44 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 6.930e-36
Identity = 68/145 (46.90%), Postives = 94/145 (64.83%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN +G+ +YN+LID ++ KGI P+  L  +D P  +E+KY   L  +  +DF  +A+ C+K+FGDRVK W T NEP +   L Y  G   P  CS+ FGNC++GNS  EP+I  H+LIL+HA AV  YR  YQ  Q G +GI+L+
Sbjct:  131 VNWKGVAYYNRLIDYMVQKGITPYANLYHYDLPLALENKYKGLLGRQVVKDFADYAEFCYKTFGDRVKNWMTFNEPRVVAALGYDNGIFAPGRCSKAFGNCTEGNSATEPYIVTHHLILAHAAAVQRYRKYYQAKQKGRVGILLD 275          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL29_ORYSJ (Beta-glucosidase 29 OS=Oryza sativa subsp. japonica GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 6.930e-36
Identity = 71/144 (49.31%), Postives = 99/144 (68.75%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPF--GNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            VN EG+  YN LI+ ++ KG++PFVT+  +D+PQ +E KYG +LS    +D+  FA++CF+ FGDRVK+W T NEP    +  Y  G H    CS P+   +C+ G+S  EP++AAH++IL+HATAV +YRTKYQ  Q G IGI
Sbjct:  110 VNKEGVAFYNNLINEIIAKGMKPFVTIFHWDTPQALESKYGGFLSENIIKDYVDFAEVCFREFGDRVKFWATFNEPWTYCSQGYGTGIHALGRCS-PYVSTSCAGGDSSREPYLAAHHVILAHATAVHLYRTKYQPTQHGQIGI 252          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL08_ORYSJ (Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 6.930e-36
Identity = 70/145 (48.28%), Postives = 96/145 (66.21%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN+EG+ +YN LID ++ +G+ P+V L  +D P  ++ KY  WLSP+    F  +A+ CFK++GDRVK WFT NEP +   L +  G  PP  C++     + GNS  EP+I AHN+ILSHATAVD YR K+Q  Q G IGI+L+
Sbjct:  137 VNTEGVAYYNNLIDYVIKQGLIPYVNLNHYDLPLALQKKYEGWLSPKIVGVFSDYAEFCFKTYGDRVKNWFTFNEPRIVAALGHDTGTDPPNRCTK---CAAGGNSATEPYIVAHNIILSHATAVDRYRNKFQASQKGKIGIVLD 278          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL09_ARATH (Beta-glucosidase 9 OS=Arabidopsis thaliana GN=BGLU9 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 9.051e-36
Identity = 70/143 (48.95%), Postives = 94/143 (65.73%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCS-QPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            +N +G+  YN LI  L   GI+P VTL  +D PQ +ED+YG W++ +  EDF  +AD+CF+ FG+ VK W TINE  +    SY  G  PP HCS   F NCS GNS  EP+IA HN++L+HA+A  +Y+ KY+  Q GSIG+
Sbjct:  111 INPKGLLFYNNLIKDLKSHGIEPHVTLYHYDLPQSLEDEYGGWINRKIIEDFTAYADVCFREFGEDVKLWTTINEATIFAIGSYDQGTAPPGHCSPNKFVNCSTGNSSTEPYIAGHNILLAHASASKLYKLKYKSKQKGSIGL 253          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL03_ARATH (Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 9.051e-36
Identity = 67/144 (46.53%), Postives = 91/144 (63.19%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            VN +G+  Y   I  L+  GI+P VTL  +D PQ +ED+YG W++    +DF  +A++CF+ FG  VK+W TINE N+     Y  G  PP  CS P  NCS GNS  EP+I  HNL+L+HA+A  +Y+ KY+  QGGS+G  L
Sbjct:  110 VNPKGLQFYKNFIQELVSHGIEPHVTLFHYDHPQYLEDEYGGWINRRIIQDFTAYANVCFREFGHHVKFWTTINEANIFTIGGYNDGITPPGRCSSPGRNCSSGNSSTEPYIVGHNLLLAHASASRLYKQKYKDMQGGSVGFSL 253          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL38_ORYSJ (Beta-glucosidase 38 OS=Oryza sativa subsp. japonica GN=BGLU38 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 1.544e-35
Identity = 72/145 (49.66%), Postives = 92/145 (63.45%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            +N +G+++Y++LID +L   I P+V L  +D PQ + D+Y  WL P    DF  FAD CFK++G +VK WFTINEP M     Y  G  PP  C+   G    GNS  EP+IAAHNL+LSHA AV  YR KYQ  Q G IGI+L+
Sbjct:  118 INKDGVDYYHRLIDYMLANNIIPYVVLYHYDLPQVLHDQYKGWLHPRIVRDFVRFADFCFKTYGHKVKNWFTINEPRMMANHGYGDGFFPPGRCT---GCQPGGNSATEPYIAAHNLLLSHAAAVRTYRDKYQAIQKGKIGILLD 259          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL20_ORYSJ (Beta-glucosidase 20 OS=Oryza sativa subsp. japonica GN=BGLU20 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.016e-35
Identity = 69/143 (48.25%), Postives = 95/143 (66.43%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            VN +G+  YN +I+ L+  GIQ  V L   D PQ ++D+YG W++P+  +DF  +AD+CF+ FGDRV +W T+ EPN+     Y  G  PP HCS PFG NC+ GNS  EP++  H+ +L+HA+AV +YR KYQ  Q G IGI
Sbjct:  122 VNPKGLQFYNNMINELVKAGIQIQVALYHSDLPQSLQDEYGGWINPKIVDDFTAYADVCFREFGDRVAHWTTVLEPNVMAQGCYDTGILPPNHCSYPFGNNCTGGNSTVEPYLFIHHNLLAHASAVRLYREKYQVAQKGIIGI 264          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL09_ORYSJ (Putative beta-glucosidase 9 OS=Oryza sativa subsp. japonica GN=BGLU9 PE=5 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 2.633e-35
Identity = 70/134 (52.24%), Postives = 91/134 (67.91%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ-PFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQ 428
            VN EGIN+YN LI+ LLLKG+Q FVTL  +D+PQ +EDKY  +LSP    D+  +A+ICFK FGDRVK+W T NEP +  + +Y  G + P  CS    G CS G+S  EP+ A H+ +L+HA  V +YR KYQ
Sbjct:  132 VNIEGINYYNNLINELLLKGVQSFVTLFHYDTPQALEDKYNGFLSPNIINDYKDYAEICFKEFGDRVKHWITFNEPWIFCSKAYASGTYAPGRCSPWEMGKCSVGDSGREPYTACHHQLLAHAETVRLYREKYQ 265          
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
BGL26_ORYSJ2.382e-3651.03Beta-glucosidase 26 OS=Oryza sativa subsp. japonic... [more]
BGL04_ARATH5.306e-3648.61Beta-glucosidase 4 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL44_ARATH6.930e-3646.90Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGL... [more]
BGL29_ORYSJ6.930e-3649.31Beta-glucosidase 29 OS=Oryza sativa subsp. japonic... [more]
BGL08_ORYSJ6.930e-3648.28Beta-glucosidase 8 OS=Oryza sativa subsp. japonica... [more]
BGL09_ARATH9.051e-3648.95Beta-glucosidase 9 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL03_ARATH9.051e-3646.53Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL38_ORYSJ1.544e-3549.66Beta-glucosidase 38 OS=Oryza sativa subsp. japonic... [more]
BGL20_ORYSJ2.016e-3548.25Beta-glucosidase 20 OS=Oryza sativa subsp. japonic... [more]
BGL09_ORYSJ2.633e-3552.24Putative beta-glucosidase 9 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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