CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL10_ARATH (Beta-glucosidase 10 OS=Arabidopsis thaliana GN=BGLU10 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.439e-35
Identity = 67/143 (46.85%), Postives = 94/143 (65.73%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCS-QPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            +N +G+  Y  LI  L+  GI+P VTL  +D PQ +ED+YG W++ +  EDF  +AD+CF+ FG+ VK W TINE  +    SY  G  PP HCS   F NC+ GNS  EP++A HN++L+HA+A  +Y+ KY+  Q GSIG+
Sbjct:  114 INPKGLLFYKNLIKELISHGIEPHVTLYHYDLPQSLEDEYGGWINRKIIEDFTAYADVCFREFGEDVKLWTTINEATIFAIGSYDQGISPPGHCSPNKFINCTSGNSSTEPYLAGHNILLAHASASKLYKLKYKSTQKGSIGL 256          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL06_ARATH (Putative beta-glucosidase 6 OS=Arabidopsis thaliana GN=BGLU6 PE=5 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.867e-35
Identity = 69/146 (47.26%), Postives = 91/146 (62.33%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            VN +G+  Y  LI  L+  GI+P+VTL  FD PQ +ED+Y  WL+    EDF  +AD+CF+ FG+ VK+W TINE N+     Y  G  PP  CS P  NC  GNS  EP+I  HNL+L+HA+   +Y+  Y+  QGGSIG  + T
Sbjct:  113 VNQKGLQFYKNLIQELVNHGIEPYVTLHHFDHPQYLEDEYEGWLNHMIVEDFTAYADVCFREFGNHVKFWTTINEGNIFSIGGYNDGDSPPGRCSIPGQNCLLGNSSTEPYIVGHNLLLAHASVSRLYKQNYKDKQGGSIGFSILT 258          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL21_ORYSJ (Beta-glucosidase 21 OS=Oryza sativa subsp. japonica GN=BGLU21 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 1.307e-34
Identity = 66/143 (46.15%), Postives = 93/143 (65.03%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            VN + +  YN +I+ L+  GIQ  V +   D PQ ++D+YG W+SP+  +DF  +AD+CF+ FGDRV +W T+ EPN      Y +G  PP  CS PFG NC+ GNS  EP++  H+ +L+HA+AV +YR KY+  Q G IGI
Sbjct:  119 VNLKALQFYNSMINELVKAGIQIHVVMYHMDLPQSLQDEYGGWISPKIVDDFTAYADVCFREFGDRVVHWTTVLEPNAMAQAGYDMGILPPNRCSYPFGSNCTAGNSSVEPYLFIHHSLLAHASAVRLYREKYKVAQKGIIGI 261          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGLS_TRIRP (Non-cyanogenic beta-glucosidase OS=Trifolium repens PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.912e-34
Identity = 72/144 (50.00%), Postives = 91/144 (63.19%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            +N EGI +YN LI+ LL  GIQPFVTL  +D PQ +ED+YG +L+     DF  + D+CFK FGDRV+YW T+NEP +     Y LG + P  CS        G+S   P+I  HN IL+HA AV +Y+TKYQ  Q G IGI L
Sbjct:  130 INHEGIKYYNNLINELLANGIQPFVTLFHWDLPQVLEDEYGGFLNSGVINDFRDYTDLCFKEFGDRVRYWSTLNEPWVFSNSGYALGTNAPGRCSAS-NVAKPGDSGTGPYIVTHNQILAHAEAVHVYKTKYQAYQKGKIGITL 272          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL27_ORYSJ (Beta-glucosidase 27 OS=Oryza sativa subsp. japonica GN=BGLU27 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.912e-34
Identity = 70/144 (48.61%), Postives = 95/144 (65.97%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPF--GNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            +N EGI  YN LI+ ++ +G++PFVT+  FD+PQ +EDKY ++LS    +DF  +AD+CF+ FGDRVK W T NEP +     Y  G   P  CS P+    C+ G+S  EP++A HNL+L+HA AV +YR KYQ  Q G IGI
Sbjct:  118 INKEGIAFYNSLINEVISRGLKPFVTIFHFDTPQALEDKYRSFLSENIVKDFVDYADVCFREFGDRVKSWNTFNEPMIFCAGGYGSGTKAPGRCS-PYVSKKCAPGDSGNEPYVAGHNLLLAHAEAVRLYRQKYQATQKGQIGI 260          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGLT_TRIRP (Cyanogenic beta-glucosidase (Fragment) OS=Trifolium repens GN=LI PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.803e-34
Identity = 70/145 (48.28%), Postives = 94/145 (64.83%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            VN EGIN+YN LI+ +L  G+QP+VTL  +D PQ +ED+Y  +L     +DF  +A++CFK FGDRVK+W T+NEP      +Y  G   P  CS     NC+ G+S  EP++AAH  +L+HA A  +Y+TKYQ  Q G IGI L
Sbjct:  120 VNREGINYYNNLINEVLANGMQPYVTLFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNAYAYGTFAPGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGITL 264          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL38_ARATH (Myrosinase 1 OS=Arabidopsis thaliana GN=TGG1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.803e-34
Identity = 71/147 (48.30%), Postives = 92/147 (62.59%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            VN   I +YN LID L+ K + PFVTL  +D PQ ++D+Y  +L+    +DF  +AD+CF+ FGDRVK W TIN+     T  Y LG   P  CS      C  GNS  EP+I AHN +L+HA AVD+YRTKY+ DQ G IG ++ T
Sbjct:  131 VNPGAIKYYNGLIDGLVAKNMTPFVTLFHWDLPQTLQDEYNGFLNKTIVDDFKDYADLCFELFGDRVKNWITINQLYTVPTRGYALGTDAPGRCSPKIDVRCPGGNSSTEPYIVAHNQLLAHAAAVDVYRTKYKDDQKGMIGPVMIT 277          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: HIUH_SOYBN (Hydroxyisourate hydrolase OS=Glycine max GN=HIUH PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.966e-34
Identity = 68/148 (45.95%), Postives = 95/148 (64.19%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPF--GNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            VN +G+ + N LI+ L+  GIQP  TL  FD PQ +ED+YG W+S +   DF Y+A++ F+ FGDRV YW T+NEPN+     Y  G  PP  CS PF   N + GNS  EP++A H+++LSH++A  +Y  KY+  Q G +GI + T
Sbjct:  125 VNPKGLQYSNNLINELISNGIQPHATLYNFDLPQVLEDEYGGWISRDIIRDFTYYAEVEFREFGDRVLYWTTVNEPNVFALGGYDQGNSPPRRCSPPFCATNDTMGNSTYEPYLAVHHILLSHSSAARLYWRKYRDKQHGFVGISIYT 272          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL05_ARATH (Putative beta-glucosidase 5 OS=Arabidopsis thaliana GN=BGLU5 PE=5 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.966e-34
Identity = 65/141 (46.10%), Postives = 89/141 (63.12%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIG 452
            VN +G+  Y  LI  L+  GI+P VTL  +D PQ +ED+YG W++    +DF  + D+CF+ FG+ VK+W T+NE N+     Y  G  PP  CS P  NC  GNS  E +I  HNL+L+HA+A  +Y+ KY+  QGGSIG
Sbjct:  112 VNQKGLQFYKNLISELITHGIEPHVTLYHYDHPQYLEDEYGGWVNNMMIKDFTAYVDVCFREFGNYVKFWTTVNEANVFTIGGYNDGDTPPGRCSLPGKNCLLGNSSTETYIVGHNLLLAHASASRLYKQKYKDKQGGSIG 252          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL37_ARATH (Myrosinase 2 OS=Arabidopsis thaliana GN=TGG2 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 6.486e-34
Identity = 71/147 (48.30%), Postives = 96/147 (65.31%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            +N +GIN+Y+ LID L+ + I PFVTL  +D PQ ++D+Y  +L     +DF  +AD+CF+ FGDRVK+W TIN+     T  Y LG   P  CSQ     C  G+S  EP+I AHN +L+HAT VD+YRT+Y K QGG IG ++ T
Sbjct:  143 INEDGINYYSGLIDGLIARNITPFVTLFHWDLPQSLQDEYEGFLDRTIIDDFKDYADLCFERFGDRVKHWITINQLFTVPTRGYALGTDAPGRCSQWVDKRCYGGDSSTEPYIVAHNQLLAHATVVDLYRTRY-KYQGGKIGPVMIT 288          
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
BGL10_ARATH3.439e-3546.85Beta-glucosidase 10 OS=Arabidopsis thaliana GN=BGL... [more]
BGL06_ARATH5.867e-3547.26Putative beta-glucosidase 6 OS=Arabidopsis thalian... [more]
BGL21_ORYSJ1.307e-3446.15Beta-glucosidase 21 OS=Oryza sativa subsp. japonic... [more]
BGLS_TRIRP2.912e-3450.00Non-cyanogenic beta-glucosidase OS=Trifolium repen... [more]
BGL27_ORYSJ2.912e-3448.61Beta-glucosidase 27 OS=Oryza sativa subsp. japonic... [more]
BGLT_TRIRP3.803e-3448.28Cyanogenic beta-glucosidase (Fragment) OS=Trifoliu... [more]
BGL38_ARATH3.803e-3448.30Myrosinase 1 OS=Arabidopsis thaliana GN=TGG1 PE=1 ... [more]
HIUH_SOYBN4.966e-3445.95Hydroxyisourate hydrolase OS=Glycine max GN=HIUH P... [more]
BGL05_ARATH4.966e-3446.10Putative beta-glucosidase 5 OS=Arabidopsis thalian... [more]
BGL37_ARATH6.486e-3448.30Myrosinase 2 OS=Arabidopsis thaliana GN=TGG2 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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