CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL23_ORYSJ (Putative beta-glucosidase 23 OS=Oryza sativa subsp. japonica GN=BGLU23 PE=5 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 8.472e-34
Identity = 69/150 (46.00%), Postives = 94/150 (62.67%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKG--------IQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIG 452
            +N +G+ +YN LID L+ +G        I+  VTL   D PQ ++D+Y  WLSP   EDF  +AD+CF+ FGD V++W T+ EPN+     Y  G  PP  CS PFG +C+ G+S  EP+ AAHN IL+HA+AV +Y  KYQ  Q G +G
Sbjct:  180 INPKGLEYYNDLIDKLVKRGEICDCSMGIEIHVTLYHLDFPQALQDEYNGWLSPRIIEDFTAYADVCFREFGDLVRHWTTVGEPNVLSIAGYDSGVIPPCRCSPPFGTSCAAGDSTVEPYFAAHNSILAHASAVRLYWDKYQAKQKGVVG 329          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL16_ARATH (Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGLU16 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 8.472e-34
Identity = 69/147 (46.94%), Postives = 91/147 (61.90%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPF-GNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            +N  GI +YN LI+ L+ KG++PFVTL  +D P  +E+ YG  L  E   DF  +A++CF+ FGDRVK W T+NEP   V   Y  G   P  CS  +  +C  G++  EP+I  HNL+L+H  AV +YR KYQ  Q G IGI LNT
Sbjct:  125 INQAGIEYYNNLINQLISKGVKPFVTLFHWDLPDALENAYGGLLGDEFVNDFRDYAELCFQKFGDRVKQWTTLNEPYTMVHEGYITGQKAPGRCSNFYKPDCLGGDAATEPYIVGHNLLLAHGVAVKVYREKYQATQKGEIGIALNT 271          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL30_ORYSJ (Beta-glucosidase 30 OS=Oryza sativa subsp. japonica GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.106e-33
Identity = 66/147 (44.90%), Postives = 94/147 (63.95%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            +N EG+  YN LI+ ++ KG+ PFVT+  +D+P  +E KYG +LS +  +++  FA++CF+ FGDRVKYW T NEP       Y  G   P  CS     +C  G+S  EP++ AH++ LSHA AV +YRTKYQ  Q G IG+++ T
Sbjct:  121 INKEGVAFYNSLINDVIAKGMIPFVTIFHWDTPLALESKYGGFLSEDIVKEYVDFAEVCFREFGDRVKYWTTFNEPFTYSAYGYGKGVFAPGRCSSYVSKSCGVGDSSREPYLVAHHIHLSHAAAVQLYRTKYQPTQKGQIGMVVVT 267          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL43_ARATH (Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGLU43 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.445e-33
Identity = 68/145 (46.90%), Postives = 91/145 (62.76%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            +NS G+ +YN+LID L+ KGI P+  L  +D P  +E KY   LS + +  F     + F++FGDRVK W T NEP +   L Y  G   P  CS+ FGNC+ GNS  EP+I AH+LIL+HA AV  YR  YQ+ Q G +GI+L+
Sbjct:  122 INSNGVAYYNRLIDYLIEKGITPYANLYHYDLPLALEQKYQGLLSKQGR--FCGLRRVLFQTFGDRVKNWMTFNEPRVVAALGYDNGIFAPGRCSEAFGNCTDGNSATEPYIVAHHLILAHAAAVQRYRQNYQEKQKGRVGILLD 264          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL19_ORYSJ (Beta-glucosidase 19 OS=Oryza sativa subsp. japonica GN=BGLU19 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.887e-33
Identity = 65/144 (45.14%), Postives = 92/144 (63.89%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG--NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            VN +G+  YN +I+ L+  GIQ    L   D PQ ++D+YG W+SP+  +DF  +AD+CF+ FGDRV +W T  EPN+     Y  G  PP  CS PFG  NC+ GNS  EP++  H+ +L+HA+AV +YR K+Q  Q G +G+
Sbjct:  135 VNPKGLQFYNSMINELVKAGIQIHAVLYHIDLPQSLQDEYGGWVSPKVVDDFAAYADVCFREFGDRVAHWTTSIEPNVMAQSGYDDGYLPPNRCSYPFGRSNCTLGNSTVEPYLFIHHTLLAHASAVRLYREKHQAAQKGVVGM 278          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL01_ARATH (Beta-glucosidase 1 OS=Arabidopsis thaliana GN=BGLU1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.465e-33
Identity = 64/144 (44.44%), Postives = 89/144 (61.81%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            +N +G+  Y   I  L+  GI+P VTL  +D PQ +ED YG W + +  +DF  +AD+CF+ FG+ VK+W TINE N+     Y  G  PP  CS P  NC+ GNS  E +I  HNL+L+HA+   +Y+ KY+  QGGS+G  L
Sbjct:  117 INPKGLQFYKNFIQELVKHGIEPHVTLHHYDFPQYLEDDYGGWTNRKIIKDFTAYADVCFREFGNHVKFWTTINEANIFTIGGYNDGNSPPGRCSFPGRNCTLGNSSTETYIVGHNLLLAHASVSRLYKQKYKDIQGGSVGFSL 260          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: MYRO_BRANA (Myrosinase OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.219e-33
Identity = 72/149 (48.32%), Postives = 95/149 (63.76%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG---NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            VN  G+++Y+KLIDALL K I PFVTL  +D PQ ++D+Y  +L  +  +DF  +AD+CFK FG +VK+W TIN+     T  Y +G   P  CS        C  GNS  EP+I AHN +L+HAT VD+YRTKY K Q G IG ++ T
Sbjct:  133 VNQGGLDYYHKLIDALLEKNITPFVTLFHWDLPQTLQDEYEGFLDRQIIQDFKDYADLCFKEFGGKVKHWITINQLYTVPTRGYAIGTDAPGRCSPMVDTKHRCYGGNSSTEPYIVAHNQLLAHATVVDLYRTKY-KFQKGKIGPVMIT 280          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL28_ORYSJ (Beta-glucosidase 28 OS=Oryza sativa subsp. japonica GN=BGLU28 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.204e-33
Identity = 65/145 (44.83%), Postives = 94/145 (64.83%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCS---QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            +N EG+  YN LI+ ++ KG++PFVT+  FD+PQ +EDKYG +LS    +D+  +AD+CF  FGDRVK W T NEP +     Y  G   P  CS P+ + S    G+S  EP++A H+L+++HA AV +YR +Y+   GG +GI
Sbjct:  118 INKEGVEFYNSLINEVIAKGLKPFVTIFHFDTPQALEDKYGGFLSENIVKDYVDYADLCFSLFGDRVKLWNTFNEPTIFCMNGYATGIMAPGRCS-PYASASCAAGGDSGREPYVAGHHLLVAHAEAVRLYRARYRAAHGGEVGI 261          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL10_ORYSJ (Beta-glucosidase 10 OS=Oryza sativa subsp. japonica GN=BGLU10 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 9.366e-33
Identity = 67/134 (50.00%), Postives = 86/134 (64.18%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ-PFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQ 428
            VN EGIN+YN LI+ LL K +QPF TL  FD+PQ +EDKY  +LSP    D+  +A+ICFK FGDRVK+W T NEP    ++ Y  G   P  CS    G C  G+S  EP+ A H+ +L+HA  V +Y+ KYQ
Sbjct:  129 VNREGINYYNNLINELLSKEVQPFATLFHFDTPQALEDKYKGFLSPNIINDYKDYAEICFKEFGDRVKHWITFNEPWNFCSMGYASGTMAPGRCSSWEKGKCRVGDSGREPYTACHHQLLAHAETVRLYKEKYQ 262          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL33_ARATH (Beta-glucosidase 33 OS=Arabidopsis thaliana GN=BGLU33 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.559e-32
Identity = 70/145 (48.28%), Postives = 89/145 (61.38%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ-PFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            VN EG+  YN LI+ LL  GIQP VTL  ++SP  +E +YG +L+    EDF  FA+ CFK FGDRVK W T NEP++     Y  G   P  CS+     C  G+S EEP+I AHN IL+H  AVD +R   + + GG IGI+L
Sbjct:  189 VNEEGVKFYNDLINELLANGIQPSVTLFHWESPLALEMEYGGFLNERIVEDFREFANFCFKEFGDRVKNWATFNEPSVYSVAGYSKGKKAPGRCSKWQAPKCPTGDSSEEPYIVAHNQILAHLAAVDEFRNCKKVEGGGKIGIVL 333          
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
BGL23_ORYSJ8.472e-3446.00Putative beta-glucosidase 23 OS=Oryza sativa subsp... [more]
BGL16_ARATH8.472e-3446.94Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGL... [more]
BGL30_ORYSJ1.106e-3344.90Beta-glucosidase 30 OS=Oryza sativa subsp. japonic... [more]
BGL43_ARATH1.445e-3346.90Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGL... [more]
BGL19_ORYSJ1.887e-3345.14Beta-glucosidase 19 OS=Oryza sativa subsp. japonic... [more]
BGL01_ARATH2.465e-3344.44Beta-glucosidase 1 OS=Arabidopsis thaliana GN=BGLU... [more]
MYRO_BRANA3.219e-3348.32Myrosinase OS=Brassica napus PE=2 SV=1[more]
BGL28_ORYSJ4.204e-3344.83Beta-glucosidase 28 OS=Oryza sativa subsp. japonic... [more]
BGL10_ORYSJ9.366e-3350.00Beta-glucosidase 10 OS=Oryza sativa subsp. japonic... [more]
BGL33_ARATH3.559e-3248.28Beta-glucosidase 33 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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