CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL01_ORYSJ (Beta-glucosidase 1 OS=Oryza sativa subsp. japonica GN=BGLU1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 6.071e-32
Identity = 68/145 (46.90%), Postives = 93/145 (64.14%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN +G+ +YN+LI+ +L  GI P+  L  +D P+ +E +YG  L+ +  E F  +A+ CFK+FGDRVK W T NEP +   L Y  G   P  C++    C+ GNS  EP+I AH+LILSHA+AV  YR KYQ  Q G IGI+L+
Sbjct:  141 VNWKGVAYYNRLINYMLKIGITPYANLYHYDLPEALEVQYGGLLNRKIVEAFADYAEFCFKTFGDRVKNWMTFNEPRVVAALGYDDGNFAPGRCTK----CTAGNSATEPYIVAHHLILSHASAVQRYRHKYQHIQKGKIGILLD 281          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL34_ARATH (Myrosinase 4 OS=Arabidopsis thaliana GN=TGG4 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.766e-31
Identity = 65/144 (45.14%), Postives = 91/144 (63.19%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            V+  GI +YN LI+ L   GI+P+VT+  +D PQ +ED+YG +LS    ED+  +A++ F+ FGDRVK+W T+N+P    T  Y  G +PP  C+   G    G+S  EP+  AHN +L+HA  V +YR +YQK QGG IG  L
Sbjct:  137 VDENGITYYNNLINELKANGIEPYVTIFHWDVPQTLEDEYGGFLSTRIVEDYTNYAELLFQRFGDRVKFWITLNQPFSLATKGYGDGSYPPGRCT---GCELGGDSGVEPYTVAHNQLLAHAKTVSLYRKRYQKFQGGKIGTTL 277          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL29_ARATH (Beta-glucosidase 29 OS=Arabidopsis thaliana GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 2.307e-31
Identity = 67/146 (45.89%), Postives = 92/146 (63.01%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGN-CSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN EG+  Y  LID L+  GIQP VTL  +D PQ +ED+YG +L+P+  EDF  FA +CF++FGD+VK W TINEP +     Y  G      CS+   + C  G+S  EP+I +H+L+LSHA AV  +R   +  Q G IGI+++
Sbjct:  123 VNKEGVQFYKALIDELIANGIQPSVTLYHWDHPQALEDEYGGFLNPQIIEDFRNFARVCFENFGDKVKMWTTINEPYVISVAGYDTGIKAVGRCSKWVNSRCQAGDSAIEPYIVSHHLLLSHAAAVQEFRNCNKTLQDGKIGIVIS 268          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL28_ARATH (Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGLU28 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.307e-31
Identity = 68/146 (46.58%), Postives = 93/146 (63.70%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGN-CSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN EG+  Y  LID L+  GI+P +TL  +D PQ +ED+YG +LSP+  EDF  F+ +CF+ FGD+VK W TINEP +     Y  G      CS+   + C  G+S  EP+IA+H+L+L+HA AV  +R K  K Q G IGI+L+
Sbjct:  123 VNKEGVEFYKALIDELVANGIEPSMTLYHWDHPQSLEDEYGGFLSPQIVEDFRDFSRVCFEEFGDKVKMWTTINEPYVITVAGYDTGNKAVGRCSKWVNSKCQGGDSGTEPYIASHHLLLAHAAAVQEFR-KCNKTQDGQIGIVLS 267          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL35_ARATH (Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 6.712e-31
Identity = 64/144 (44.44%), Postives = 90/144 (62.50%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            V+  GI +YN LI+ L   GI+P+VT+  +D PQ +ED+YG +LS    ED+  +A++ F+ FGDRVK+W T+N+P       Y  G +PP  C+   G    G+S  EP+  AHN +L+HA  V +YR +YQK QGG IG  L
Sbjct:  137 VDENGITYYNNLINELKANGIEPYVTIFHWDVPQTLEDEYGGFLSTRIVEDYTNYAELLFQRFGDRVKFWITLNQPLSLALKGYGNGSYPPGRCT---GCELGGDSGVEPYTVAHNQLLAHAKTVSLYRKRYQKFQGGKIGTTL 277          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: MYRA_SINAL (Myrosinase MA1 OS=Sinapis alba PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 8.767e-31
Identity = 66/142 (46.48%), Postives = 88/142 (61.97%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIG 452
            VN +GI++Y+ LI  L+ KGI PFVTL  +D PQ ++D+Y  +L P+  +DF  +AD+CF+ FGD VKYW TIN+     T  Y      P  CS     +C  GNS  EP+I AH+ +L+HA  VD+YR  Y   QGG IG
Sbjct:  113 VNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNY-THQGGKIG 253          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL30_ARATH (Beta-glucosidase 30 OS=Arabidopsis thaliana GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.145e-30
Identity = 66/146 (45.21%), Postives = 88/146 (60.27%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN EG+  Y  LID LL   IQP +TL  +D PQ +ED+YG +LSP+  EDF  FA ICF+ FGD+VK W TINEP +     Y  G      CS+     C  G+S  EP+I +H+ +L+HA AV+ +R   +    G IGI+L+
Sbjct:  120 VNKEGVQFYKDLIDELLANDIQPSMTLYHWDHPQSLEDEYGGFLSPKIVEDFRDFARICFEEFGDKVKMWTTINEPYIMTVAGYDQGNKAAGRCSKWVNEKCQAGDSSTEPYIVSHHTLLAHAAAVEEFRKCEKTSHDGQIGIVLS 265          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: MYR3_SINAL (Myrosinase MB3 OS=Sinapis alba PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.551e-30
Identity = 68/149 (45.64%), Postives = 90/149 (60.40%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG---NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            V+  G+++Y+ LIDALL K I PFVTL  +D PQ ++D+Y  +L  +  +DF  +AD+CFK FG +VK W TIN+     T  Y LG   P  CS        C  GNS  EP+I AHN +L+HA  VD+YRT Y   Q G IG ++ T
Sbjct:  133 VDQAGLDYYHNLIDALLEKNITPFVTLFHWDLPQTLQDEYEGFLDRQIIQDFKDYADLCFKEFGGKVKNWITINQLYTVPTRGYALGTDAPGRCSPKVDTKQRCYGGNSSTEPYIVAHNQLLAHAAIVDLYRTNY-AFQNGKIGPVMIT 280          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL42_ARATH (Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGLU42 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.551e-30
Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            +VN EGI  YN LI+ LL KGIQP+VTL  +D P  +++  G W + +  + FG +AD CF +FGDRVK+W T+NEP       + +G   P    +P           EP++ +H+ +L+HATAV IYR+KY++ QGG IG+
Sbjct:  108 EVNEEGIAFYNDLINTLLEKGIQPYVTLYHWDLPSHLQEAIGGWTNRKIVDYFGLYADACFANFGDRVKHWITLNEPLQTSVNGHCIGIFAPGRNEKPL---------IEPYLVSHHQVLAHATAVSIYRSKYKESQGGQIGL 241          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGLC_MAIZE (Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.351e-30
Identity = 63/140 (45.00%), Postives = 89/140 (63.57%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQ---EDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKD 434
            +N +GI +Y  LI+ LL  GI+P+VT+  +D PQ +E+KYG +L    +   ED+ YFA +CF +FGD+VK W T NEP    + SY  G   P  CS P  +C+   GNS  EP+ A HN++L+HA AVD+Y   Y++D
Sbjct:  168 INPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYGTGVFAPGRCS-PGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRD 306          
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
BGL01_ORYSJ6.071e-3246.90Beta-glucosidase 1 OS=Oryza sativa subsp. japonica... [more]
BGL34_ARATH1.766e-3145.14Myrosinase 4 OS=Arabidopsis thaliana GN=TGG4 PE=1 ... [more]
BGL29_ARATH2.307e-3145.89Beta-glucosidase 29 OS=Arabidopsis thaliana GN=BGL... [more]
BGL28_ARATH2.307e-3146.58Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGL... [more]
BGL35_ARATH6.712e-3144.44Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 ... [more]
MYRA_SINAL8.767e-3146.48Myrosinase MA1 OS=Sinapis alba PE=1 SV=2[more]
BGL30_ARATH1.145e-3045.21Beta-glucosidase 30 OS=Arabidopsis thaliana GN=BGL... [more]
MYR3_SINAL2.551e-3045.64Myrosinase MB3 OS=Sinapis alba PE=1 SV=1[more]
BGL42_ARATH2.551e-3043.36Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGL... [more]
BGLC_MAIZE4.351e-3045.00Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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