CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL1B_PHACH (Beta-glucosidase 1B OS=Phanerochaete chrysosporium GN=BGL1B PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.351e-30
Identity = 67/146 (45.89%), Postives = 92/146 (63.01%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLS-PESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN  GI  Y+ LIDALL +GI PFVTL  +D PQ + D+Y  WL+  E  +D+  +A +CF+ FGDRVK+W T+NEP     L Y  G   P   S       +G+S  EP+I  H++IL+HA AV +YR +++ ++GG IGI LN
Sbjct:  100 VNEAGIKFYSDLIDALLERGIVPFVTLYHWDLPQALHDRYLGWLNKDEIVQDYVRYAGVCFERFGDRVKHWLTMNEPWCISILGYGRGVFAPGRSSDRM-RSPEGDSSTEPWIVGHSVILAHAYAVKLYREQFKANRGGQIGITLN 244          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL1A_PHACH (Beta-glucosidase 1A OS=Phanerochaete chrysosporium GN=BGL1A PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.653e-29
Identity = 64/147 (43.54%), Postives = 91/147 (61.90%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQ-EDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            VN  GI HY  LI+ L+ +GI PFVTL  +D PQ ++D+YG WL+ E   +DF  +A +CF+SFGD V+ W T NEP +   + Y  G   P H            S  EP+I +H++IL+HA AV +YR ++++ QGG IGI L++
Sbjct:   95 VNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYGNGIFAPGHV-----------SNTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDS 230          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL32_ARATH (Beta-glucosidase 32 OS=Arabidopsis thaliana GN=BGLU32 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 6.283e-29
Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGN-CSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN EG+  Y  LID L+  GI+PFVT+  +D PQ ++D+YG++LSP   +DF  FA  CF+ FGD+V  W T NEP +     Y  G      CS+   + C  G+S  EP++ +HNL+L+HA AV+ +R   +  Q   IGI+L+
Sbjct:  126 VNKEGVQFYKNLIDELIKNGIKPFVTIYHWDIPQALDDEYGSFLSPRIIDDFRNFARFCFQEFGDKVSMWTTFNEPYVYSVSGYDAGNKAIGRCSKWVNSLCIAGDSGTEPYLVSHNLLLAHAAAVEEFRKCDKISQDAKIGIVLS 271          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL04_ORYSJ (Beta-glucosidase 4 OS=Oryza sativa subsp. japonica GN=BGLU4 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.400e-28
Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 3
Query:   27 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            +VN +G+  YN LI+ ++ KGI+P+ TL  +D P  ++   G WLS +  E F  +A+ CF +FGDRVK+W TINEP       Y +G   P  C      C         ++AAH  IL+HA AVD+YR K++  QGG +G++++
Sbjct:  102 NVNEQGVAFYNDLINFMIEKGIEPYATLYHWDLPHNLQQTVGGWLSDKIVEYFALYAEACFANFGDRVKHWITINEPLQTAVNGYGIGHFAPGGCEGETARC---------YLAAHYQILAHAAAVDVYRRKFKAVQGGEVGLVVD 238          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL08_ARATH (Beta-glucosidase 8 OS=Arabidopsis thaliana GN=BGLU8 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.072e-28
Identity = 60/142 (42.25%), Postives = 86/142 (60.56%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            +N +G+  Y  LI  L   GI+P VTL  +D PQ +ED+YG W++ +  EDF  FAD+CF+ FG+ VK W TINE  +     Y             +GNC+ GN   E +IA HN++L+HA+A ++Y+ KY+  Q GSIG+
Sbjct:  111 INPKGLLFYKNLIKELRSHGIEPHVTLYHYDLPQSLEDEYGGWINHKIIEDFTAFADVCFREFGEDVKLWTTINEATIFAFAFYGKDVR--------YGNCTTGNYCMETYIAGHNMLLAHASASNLYKLKYKSKQRGSIGL 244          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL31_ARATH (Beta-glucosidase 31 OS=Arabidopsis thaliana GN=BGLU31 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 5.319e-28
Identity = 60/146 (41.10%), Postives = 89/146 (60.96%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGN-CSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            VN EG+  Y  LID L+  GI+PFVT+  +D PQ ++D+YG++LSP   +DF  +A  CF+ FGD+V  W T NEP +     Y  G      CS+   + C  G+S  EP++ +H+L+L+HA AV+ +R   +  Q   IGI+L+
Sbjct:  126 VNKEGVQFYKNLIDELIENGIKPFVTIYHWDIPQALDDEYGSFLSPRIIDDFRNYARFCFQEFGDKVSMWTTFNEPYVYSVSGYDAGNKAMGRCSKWVNSLCIAGDSGTEPYLVSHHLLLAHAAAVEEFRKCDKISQDSKIGIVLS 271          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL23_ARATH (Beta-glucosidase 23 OS=Arabidopsis thaliana GN=BGLU23 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 9.072e-28
Identity = 61/143 (42.66%), Postives = 87/143 (60.84%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPF-GNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            V+  G+  Y+ LID L+  GI PFVT+  +D+PQ++ED+YG +LS    +DF  +AD  F+ +G +VK+W T NEP +     Y +G   P  CS      C  G S  E ++  HNL++SHA AV+ YR K +K +GG IGI
Sbjct:  129 VSQAGVQFYHDLIDELIKNGITPFVTVFHWDTPQDLEDEYGGFLSERIVKDFREYADFVFQEYGGKVKHWITFNEPWVFSHAGYDVGKKAPGRCSSYVNAKCQDGRSGYEAYLVTHNLLISHAEAVEAYR-KCEKCKGGKIGI 270          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL20_ARATH (Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGLU20 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.547e-27
Identity = 60/146 (41.10%), Postives = 89/146 (60.96%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGN----CSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            ++  G+ +Y+ LID LL  GI P VT+  +D+PQ++ED+YG +LS    +DF  +A+  F+ +GD+VK+W T NEP +     Y +G   P  CS+        C  G S  E +I +HN++L+HA AVD +R K  K +GG IGI
Sbjct:  131 ISKAGVQYYHDLIDELLANGITPLVTVFHWDTPQDLEDEYGGFLSDRIIKDFTEYANFTFQEYGDKVKHWITFNEPWVFSRAGYDIGNKAPGRCSKYIKEHGEMCHDGRSGHEAYIVSHNMLLAHADAVDAFR-KCDKCKGGKIGI 275          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL39_ARATH (Putative myrosinase 3 OS=Arabidopsis thaliana GN=TGG3 PE=5 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.021e-27
Identity = 62/145 (42.76%), Postives = 84/145 (57.93%), Query Frame = 3
Query:   33 NSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            N  G+ +YN LID LL K I PFVTL  +D PQ ++D+Y  +L+ E  +DF  +A++CFK FGDRVK W TIN+     T  Y +G   P                 EP+I AHN +L+HA  V +YR KY+  Q G IG+++ T
Sbjct:  118 NQAGVKYYNDLIDGLLAKNITPFVTLFHWDLPQVLQDEYEGFLNHEIIDDFKDYANLCFKIFGDRVKKWITINQLYTVPTRGYAMGTDAP-----------------EPYIVAHNQLLAHAKVVHLYRKKYKPKQRGQIGVVMIT 245          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL21_ARATH (Beta-glucosidase 21 OS=Arabidopsis thaliana GN=BGLU21 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.447e-27
Identity = 61/144 (42.36%), Postives = 89/144 (61.81%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            V+  G+  Y++LID LL  GI PFVT+  +D+PQ++ED+YG +LS    +DF  +AD  F  +G +VK W T NEP +     Y LG   P  CS+    C   +G S +E ++ +HNL+ +HA AV+++R   QK +GG IGI
Sbjct:  130 VSQAGVQFYHELIDELLKNGIVPFVTVFHWDTPQDLEDEYGGFLSQNIVKDFREYADYVFTEYGGKVKNWITFNEPWVFAHAGYDLGKKAPGRCSRYVPGCEDREGQSGKEAYLVSHNLLNAHAEAVEVFR---QKVKGGKIGI 270          
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
BGL1B_PHACH4.351e-3045.89Beta-glucosidase 1B OS=Phanerochaete chrysosporium... [more]
BGL1A_PHACH1.653e-2943.54Beta-glucosidase 1A OS=Phanerochaete chrysosporium... [more]
BGL32_ARATH6.283e-2942.47Beta-glucosidase 32 OS=Arabidopsis thaliana GN=BGL... [more]
BGL04_ORYSJ1.400e-2839.73Beta-glucosidase 4 OS=Oryza sativa subsp. japonica... [more]
BGL08_ARATH4.072e-2842.25Beta-glucosidase 8 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL31_ARATH5.319e-2841.10Beta-glucosidase 31 OS=Arabidopsis thaliana GN=BGL... [more]
BGL23_ARATH9.072e-2842.66Beta-glucosidase 23 OS=Arabidopsis thaliana GN=BGL... [more]
BGL20_ARATH1.547e-2741.10Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGL... [more]
BGL39_ARATH2.021e-2742.76Putative myrosinase 3 OS=Arabidopsis thaliana GN=T... [more]
BGL21_ARATH3.447e-2742.36Beta-glucosidase 21 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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