CX309298

Overview
NameCX309298
Unique NameCX309298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL27_ARATH (Beta-glucosidase 27 OS=Arabidopsis thaliana GN=BGLU27 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 4.502e-27
Identity = 64/143 (44.76%), Postives = 85/143 (59.44%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCS-QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            VN EGI  YN LID LL  GI P  TL  +D+PQ +ED+Y  +LS E+ +DF  FA +CF+ FGDRVK W T+NEP +     Y  G   P   S+     +  G S  E +  +HNL+L+HA AV+++R    K + G IGI
Sbjct:  108 VNKEGIQFYNDLIDELLANGITPLATLFHWDTPQALEDEYSGFLSEEAVDDFKDFAALCFEEFGDRVKLWVTLNEPWVYSIGGYDTGRKAPGRASKYMNEAAVAGESGLEVYTVSHNLLLAHAEAVEVFRNN-PKCKDGKIGI 249          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL25_ARATH (Probable inactive beta-glucosidase 25 OS=Arabidopsis thaliana GN=BGLU25 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 7.680e-27
Identity = 64/144 (44.44%), Postives = 83/144 (57.64%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGII 458
            V+  G+  YN LI+ L+  G+ P VTL Q+D PQ +ED+YG +LS    EDF  FA   F  +GDRVK+W TINEP       Y  G   P  CS+     C  G S  E +  +HNL+L+HA AV+ +R K  K  GG IGI+
Sbjct:  129 VSETGVKFYNDLINELIANGVTPLVTLFQWDVPQALEDEYGGFLSDRILEDFRDFAQFAFNKYGDRVKHWVTINEPYEFSRGGYETGEKAPGRCSKYVNEKCVAGKSGHEVYTVSHNLLLAHAEAVEEFR-KCGKCTGGKIGIV 271          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL36_ARATH (Putative myrosinase 6 OS=Arabidopsis thaliana GN=TGG6 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.310e-26
Identity = 61/145 (42.07%), Postives = 86/145 (59.31%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ-PFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            V+  GI +YN LI+ L   GI+PFVT+  +D PQ+   +    L P +  DF  +A++ F+ FGDRVK+W T+N+P       Y  G +PP  C+   FG    G+S  EP+I  H+ +L+H  AV +YR +YQK QGG IG  L
Sbjct:  112 VDENGITYYNNLINELKANGIEPFVTIFHWDVPQDFRRRIWRLLKP-TYSDFKNYAELLFQRFGDRVKFWITLNQPYSLAVKGYGDGQYPPGRCTDCEFG----GDSGTEPYIVGHHELLAHMEAVSLYRKRYQKFQGGKIGTTL 251          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL26_ARATH (Beta-glucosidase 26, peroxisomal OS=Arabidopsis thaliana GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.711e-26
Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCS-QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILN 464
            V+ EGI  YN +ID LL   I P VT+  +D PQ++ED+YG +LS +  +DF  +A +CF+ FGDRV  W T+NEP +     Y  G   P  CS+     S  G S  E +I +HN++L+HA AV+++R K    + G IGI  N
Sbjct:  109 VSEEGIKFYNDVIDELLANEITPLVTIFHWDIPQDLEDEYGGFLSEQIIDDFRDYASLCFERFGDRVSLWCTMNEPWVYSVAGYDTGRKAPGRCSKYVNGASVAGMSGYEAYIVSHNMLLAHAEAVEVFR-KCDHIKNGQIGIAHN 253          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL19_ARATH (Beta-glucosidase 19 OS=Arabidopsis thaliana GN=BGLU19 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.918e-26
Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCS---QPFGN-CSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            ++ EG+  Y+ LID LL   I P VT+  +D+P ++ED+YG +LS     DF  +A+  F  +GD+VK W T NEP +     Y +G   P  CS   + FG  C  G S  EP++ +HNL++ HA AVD +R K +K +GG IGI
Sbjct:  127 ISKEGVQFYHDLIDELLKNDITPLVTVFHWDTPADLEDEYGGFLSERIVPDFVEYANFTFHEYGDKVKNWITFNEPWVFSRSGYDVGKKAPGRCSPYVKEFGKLCQDGRSGFEPYVVSHNLLVGHAEAVDAFR-KCEKCKGGKIGI 271          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL07_ARATH (Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU7 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 60/142 (42.25%), Postives = 86/142 (60.56%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            +N +G+  Y  LI  L   GI+P VTL  +D PQ +ED+YG W++ +  EDF  FAD+CF+ FG+ VK W  INE  +    SY  G     HC  P  N S  N   E +IA HN++L+H++A ++Y+ KY+  Q GS+G+
Sbjct:  112 INPKGLLFYKNLIKELRSHGIEPQVTLYHYDLPQSLEDEYGGWINRKIIEDFTAFADVCFREFGEDVKLWTKINEATLFAIGSYGDGMR-YGHC--PPMNYSTANVCTETYIAGHNMLLAHSSASNLYKLKYKTKQRGSVGL 250          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL22_ARATH (Beta-glucosidase 22 OS=Arabidopsis thaliana GN=BGLU22 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.978e-26
Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGI 455
            V+  G+  Y+ LID LL  GI PFVT+  +D+PQ++ED+YG +LS    +DF  +AD  F  +G +VK W T NEP +     Y +G   P  CS+    C    G S  E ++ +HNL+ +HA AV+++R   QK +GG IGI
Sbjct:  130 VSQAGVKFYHDLIDELLKNGIIPFVTVFHWDTPQDLEDEYGGFLSENIVKDFREYADYVFTEYGGKVKNWITFNEPWVFAHAGYDVGKKAPGRCSRYLKGCEDRDGRSGYEAYLVSHNLLNAHAEAVEVFR---QKVKGGKIGI 270          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: GBA3_PONAB (Cytosolic beta-glucosidase OS=Pongo abelii GN=GBA3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.501e-26
Identity = 63/144 (43.75%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            +N +GI++YNK+ID LL  G+ P VTL  FD PQ +ED+ G WLS    E F  +A  CF +FGDRVK W TINE N+   +SY LG  PP      FG           + AAHNLI +HA +   Y + ++K+Q G + + L
Sbjct:   92 INQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQALEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKKWITINEANVLSVMSYDLGMFPPG--IPHFGTGG--------YQAAHNLIKAHARSWHSYNSLFRKEQKGMVSLSL 224          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: GBA3_HUMAN (Cytosolic beta-glucosidase OS=Homo sapiens GN=GBA3 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 1.892e-25
Identity = 63/144 (43.75%), Postives = 83/144 (57.64%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 461
            +N +GI++YNK+ID LL  G+ P VTL  FD PQ +ED+ G WLS    E F  +A  CF +FGDRVK W TINE N+   +SY LG  PP      FG           + AAHNLI +HA +   Y + ++K Q G + + L
Sbjct:   92 INQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPG--IPHFGTGG--------YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSL 224          
BLAST of CX309298 vs. ExPASy Swiss-Prot
Match: BGL35_ORYSJ (Putative beta-glucosidase 35 OS=Oryza sativa subsp. japonica GN=BGLU35 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 3.227e-25
Identity = 58/151 (38.41%), Postives = 86/151 (56.95%), Query Frame = 3
Query:   30 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP----QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNT 467
            +N EG+  YN LI+ ++ KG+ PFVT+  +D+P    ++I        S   ++D+  FA++CF  FGDRVKYW T NEP       Y  G      C+     +C  G+S  EP++  H++ LSHA  V +YRT+YQ  Q G IG+++ T
Sbjct:  123 INREGVAFYNSLINDVIAKGMIPFVTIFHWDTPPGSGKQIRRLPERKHSNMHEKDYADFAEVCFHEFGDRVKYWTTFNEPFTYSAYGYGGGVFASGRCAPYVSKSCGAGDSSREPYLVTHHIHLSHAAVVHLYRTRYQPTQKGQIGMVVVT 273          
The following BLAST results are available for this feature:
BLAST of CX309298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
BGL27_ARATH4.502e-2744.76Beta-glucosidase 27 OS=Arabidopsis thaliana GN=BGL... [more]
BGL25_ARATH7.680e-2744.44Probable inactive beta-glucosidase 25 OS=Arabidops... [more]
BGL36_ARATH1.310e-2642.07Putative myrosinase 6 OS=Arabidopsis thaliana GN=T... [more]
BGL26_ARATH1.711e-2642.47Beta-glucosidase 26, peroxisomal OS=Arabidopsis th... [more]
BGL19_ARATH2.918e-2641.78Beta-glucosidase 19 OS=Arabidopsis thaliana GN=BGL... [more]
BGL07_ARATH3.812e-2642.25Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL22_ARATH4.978e-2641.67Beta-glucosidase 22 OS=Arabidopsis thaliana GN=BGL... [more]
GBA3_PONAB6.501e-2643.75Cytosolic beta-glucosidase OS=Pongo abelii GN=GBA3... [more]
GBA3_HUMAN1.892e-2543.75Cytosolic beta-glucosidase OS=Homo sapiens GN=GBA3... [more]
BGL35_ORYSJ3.227e-2538.41Putative beta-glucosidase 35 OS=Oryza sativa subsp... [more]

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Properties
Property NameValue
Genbank descriptionC20002C09SK OF2 Citrus clementina cDNA clone C20002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309298 ID=CX309298; Name=CX309298; organism=Citrus clementina; type=EST; length=467bp
CNNNNNNNNNNNNNNNNNNNNNNNGGGACGTCAATTCAGAGGGTATTAAC
CACTACAACAAGCTCATTGATGCCCTCTTACTGAAAGGGATCCAGCCATT
TGTGACACTGACTCAATTTGATAGTCCTCAAGAAATTGAAGACAAATACG
GAGCCTGGCTAAGCCCTGAATCACAGGAGGATTTTGGATATTTTGCAGAC
ATTTGTTTTAAATCTTTCGGAGACCGAGTGAAATACTGGTTCACCATCAA
TGAGCCAAATATGCAGGTTACCCTTAGTTATCGTTTAGGCTGCCATCCCC
CAGCTCATTGCTCGCAGCCATTTGGAAATTGCAGTCAGGGCAATTCAGAG
GAGGAGCCTTTTATAGCAGCTCACAATCTCATCTTATCGCATGCAACTGC
AGTTGATATATACCGAACCAAATACCAGAAAGATCAAGGAGGCAGCATTG
GCATTATCTTAAACACA
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