DY256638

Overview
NameDY256638
Unique NameDY256638
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length965
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY256638 vs. ExPASy Swiss-Prot
Match: APT_SALTI (Adenine phosphoribosyltransferase OS=Salmonella typhi GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.265e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3 
Query:  189 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 659
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY256638 vs. ExPASy Swiss-Prot
Match: APT_SALSV (Adenine phosphoribosyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.265e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3 
Query:  189 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 659
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY256638 vs. ExPASy Swiss-Prot
Match: APT_SALPK (Adenine phosphoribosyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.265e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3 
Query:  189 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 659
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY256638 vs. ExPASy Swiss-Prot
Match: APT_SALPC (Adenine phosphoribosyltransferase OS=Salmonella paratyphi C (strain RKS4594) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.265e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3 
Query:  189 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 659
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY256638 vs. ExPASy Swiss-Prot
Match: APT_SALPB (Adenine phosphoribosyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.265e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3 
Query:  189 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 659
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY256638 vs. ExPASy Swiss-Prot
Match: APT_SALPA (Adenine phosphoribosyltransferase OS=Salmonella paratyphi A GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.265e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3 
Query:  189 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 659
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY256638 vs. ExPASy Swiss-Prot
Match: APT_SALNS (Adenine phosphoribosyltransferase OS=Salmonella newport (strain SL254) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.265e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3 
Query:  189 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 659
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY256638 vs. ExPASy Swiss-Prot
Match: APT_SALEP (Adenine phosphoribosyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.265e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3 
Query:  189 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 659
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY256638 vs. ExPASy Swiss-Prot
Match: APT_SALDC (Adenine phosphoribosyltransferase OS=Salmonella dublin (strain CT_02021853) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.265e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3 
Query:  189 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 659
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of DY256638 vs. ExPASy Swiss-Prot
Match: APT_SALCH (Adenine phosphoribosyltransferase OS=Salmonella choleraesuis GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.265e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3 
Query:  189 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 659
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167
The following BLAST results are available for this feature:
BLAST of DY256638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SALTI1.265e-4352.23Adenine phosphoribosyltransferase OS=Salmonella ty... [more]
APT_SALSV1.265e-4352.23Adenine phosphoribosyltransferase OS=Salmonella sc... [more]
APT_SALPK1.265e-4352.23Adenine phosphoribosyltransferase OS=Salmonella pa... [more]
APT_SALPC1.265e-4352.23Adenine phosphoribosyltransferase OS=Salmonella pa... [more]
APT_SALPB1.265e-4352.23Adenine phosphoribosyltransferase OS=Salmonella pa... [more]
APT_SALPA1.265e-4352.23Adenine phosphoribosyltransferase OS=Salmonella pa... [more]
APT_SALNS1.265e-4352.23Adenine phosphoribosyltransferase OS=Salmonella ne... [more]
APT_SALEP1.265e-4352.23Adenine phosphoribosyltransferase OS=Salmonella en... [more]
APT_SALDC1.265e-4352.23Adenine phosphoribosyltransferase OS=Salmonella du... [more]
APT_SALCH1.265e-4352.23Adenine phosphoribosyltransferase OS=Salmonella ch... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1AH04ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256638 ID=DY256638; Name=DY256638; organism=Citrus clementina; type=EST; length=965bp
GATCTCAAACGCAGACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCT
GTTCGCCTACCGTTGAACCGCTCGCAAAATTACAGAATTGCACTCCCTCC
TCTGCATTCCACCGTGAGTGGTGACTCGACGCAACCTCAACAAATGGCTT
CAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCA
ATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATTATGTTTCAAGATAT
CACAACATTGCTTCTTGATACCAAGGCTTTTAGAGATACTATTGATCTGT
TCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAA
GCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAA
GTTTGTTCCTATGAGGAAACCTAAAAAGCTTCCTGGGGAGGTTATTTCCG
AAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGATGCATGTAGGT
GCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAAC
TGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGC
ATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGG
GAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCTAAACTTGACC
TCAGGTTATGGTTTAAATGCAATGTTTGTGGACCATATGGGTTTCTAGTC
GCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCATCTGGTAATA
TAAGAGCAGTTTCATTGGCTTTTTATTTTATTAAGACCTTGGGAAAAAAA
TGTTGGGGAAACTGGGTTCTGTCTGCTATTGTTGGGTTTAAAAATGATAG
GCTTATGAAAAAATCCATCCTCCCGAAAACAGCTGTATTTGATGCTTTTC
AATTATCTGGAAATT
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