DY256691

Overview
NameDY256691
Unique NameDY256691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length902
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC3_MAIZE (Pyruvate decarboxylase isozyme 3 (Fragment) OS=Zea mays GN=PDC3 PE=2 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.378e-97
Identity = 170/203 (83.74%), Postives = 182/203 (89.66%), Query Frame = 1
Query:  115 PKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 723
            P EPLRVNVLF+H+QKML+ ++AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGA LGY Q    KRVIA IGDGSFQVTAQDVST+LRC Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTG VDAIHNG GKCWT+KV  EE+L  AIE A G +KDCLCFIEV+ HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:    1 PNEPLRVNVLFKHVQKMLTGDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYPQGANHKRVIAFIGDGSFQVTAQDVSTILRCEQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGFVDAIHNGLGKCWTSKVKSEEDLTAAIETALG-EKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ 202          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC1_TOBAC (Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nicotiana tabacum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.770e-74
Identity = 131/149 (87.92%), Postives = 139/149 (93.29%), Query Frame = 1
Query:    1 VLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYT 447
            VLM+DFL AL+KRLK N TA+ENYHRIYVPEG P KCEPKE LRVNVLFQHIQ MLS ++ VIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQ+ PEKRVIACIGDGSFQVTAQD+STMLRCGQ+TIIFLINNGGYT
Sbjct:  270 VLMRDFLAALAKRLKHNPTAFENYHRIYVPEGHPLKCEPKEALRVNVLFQHIQNMLSGDSVVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQAAPEKRVIACIGDGSFQVTAQDISTMLRCGQRTIIFLINNGGYT 418          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC3_SCHPO (Probable pyruvate decarboxylase C186.09 OS=Schizosaccharomyces pombe GN=SPAC186.09 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.443e-54
Identity = 109/242 (45.04%), Postives = 149/242 (61.57%), Query Frame = 1
Query:    1 VLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAI----ENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPP 714
            VL++DFL  L+K++K+N  +   Y RI     + P   PK  L    + + +Q +++ ET +  +TGDSWF   ++ LP+   +E +MQ+G IGWSV +  GYA   P++ V+  +GDGSFQ T Q+VS M+R     I+FLINN GYTIEVEIHDGPYN IKNW+Y  +V+A + GEG     +V    EL EAI    EN+ GP       IE  + +DD SKEL+ WG  V AAN +PP
Sbjct:  333 VLLRDFLHELAKKVKANNASVVEYKRIRPESLEIPMENPKAALNRKEIIRQVQNLVNQETTLFVDTGDSWFGGMRITLPEKARFEIEMQWGHIGWSVPSAFGYAIGAPKRNVVVFVGDGSFQETVQEVSQMVRLNLPIIMFLINNRGYTIEVEIHDGPYNRIKNWDYAAIVEAFNAGEGHAKGFRVGNGHELAEAIRQAKENSQGP-----TLIECNIDQDDCSKELINWGHNVGAANGKPP 569          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC_ZYMMO (Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.493e-51
Identity = 110/247 (44.53%), Postives = 153/247 (61.94%), Query Frame = 1
Query:    1 VLMKDFLKALSKRLKSNTTAYENYHRIYVPE-GQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIH------NGEGKCWTTKVFCE--EELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPP 714
            V +KD+L  L++++   T A + +  +   E  +    +P  PL    + + ++ +L+  T VIAETGDSWFN Q++KLP G   E++MQ+G IGWSV A  GYA   PE+R I  +GDGSFQ+TAQ+V+ M+R     IIFLINN GYTIEV IHDGPYN IKNW+Y GL++  +      +G GK    K   E  E +  A+ N  GP       IE  + ++D ++EL++WG RV+AANSR P
Sbjct:  322 VHLKDYLTRLAQKVSKKTGALDFFKSLNAGELKKAAPADPSAPLVNAEIARQVEALLTPNTTVIAETGDSWFNAQRMKLPNGARVEYEMQWGHIGWSVPAAFGYAVGAPERRNILMVGDGSFQLTAQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLKAKTGGELAEAIKVALANTDGP-----TLIECFIGREDCTEELVKWGKRVAAANSRKP 563          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC2_SCHPO (Probable pyruvate decarboxylase C1F8.07c OS=Schizosaccharomyces pombe GN=SPAC1F8.07c PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 4.345e-51
Identity = 100/238 (42.02%), Postives = 147/238 (61.76%), Query Frame = 1
Query:    1 VLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPP 714
            V M +FL+ L+K++       E Y++       P   EPK  L    + + IQ ++ S T + AETGDSWFN  ++KLP G  +E +MQ+G IGWSV + +GYA + PE+R I  +GDGSFQ+T Q++S M+R     +IFL+NN GYTIE++IHDGPYN I+NW++    ++++   GK         EEL  AI+ A    K+    IE  +  DD ++EL++WG  V++AN+RPP
Sbjct:  329 VYMAEFLELLAKKVSKKPATLEAYNKARPQTVVPKAAEPKAALNRVEVMRQIQGLVDSNTTLYAETGDSWFNGLQMKLPAGAKFEVEMQWGHIGWSVPSAMGYAVAAPERRTIVMVGDGSFQLTGQEISQMIRHKLPVLIFLLNNRGYTIEIQIHDGPYNRIQNWDFAAFCESLNGETGKAKGLHAKTGEELTSAIKVAL-QNKEGPTLIECAIDTDDCTQELVDWGKAVASANARPP 565          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC2_MAIZE (Pyruvate decarboxylase isozyme 2 (Fragment) OS=Zea mays GN=PDC2 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.274e-50
Identity = 92/106 (86.79%), Postives = 97/106 (91.51%), Query Frame = 1
Query:  406 QKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 723
            Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLV+A HNGEG C+T KV  EEEL EA+E A GPKKDCLCFIEV+VHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:    1 QNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVEAFHNGEGACYTAKVRTEEELTEALEAALGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 106          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC_NEUCR (Pyruvate decarboxylase OS=Neurospora crassa GN=cfp PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.070e-49
Identity = 106/238 (44.54%), Postives = 145/238 (60.92%), Query Frame = 1
Query:    1 VLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPP 714
            V M +FL  L+ ++  N +    Y R+          E +EPL    + + +Q+ML+ +T++  +TGDSWFN  +LKLP G  +E +MQ+G IGWS+ A  GYA   P++  I  +GDGSFQVTAQ+VS M+R      I LINN GYTIEVEIHDG YN IKNW+Y  LV+A ++ +G           EL +AI+ A    K+    IE  + +DD SKEL+ WG  V+AAN+RPP
Sbjct:  327 VRMCEFLSHLATQVTFNDSTMIEYKRLKPDPPHVHTAEREEPLSRKEISRQVQEMLTDKTSLFVDTGDSWFNGIQLKLPPGAKFEIEMQWGHIGWSIPAAFGYALRHPDRHTIVLVGDGSFQVTAQEVSQMVRFKVPITIMLINNRGYTIEVEIHDGSYNKIKNWDYAMLVEAFNSTDGHAKGLLANTAGELADAIKVAES-HKEGPTLIECTIDQDDCSKELITWGHYVAAANARPP 563          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC1_CANGA (Pyruvate decarboxylase OS=Candida glabrata GN=PDC1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.838e-25
Identity = 79/236 (33.47%), Postives = 117/236 (49.58%), Query Frame = 1
Query:   25 ALSKRLKSNTTAYENYHRIYVPEGQPPK--CEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 708
            AL K L +   A + Y  + VP   P    C+P  PL+   ++  + K L     VI ETG S F   +   P       Q+ +GSIG++ GA LG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH     YN I+NW++  L+     G       +V    E  +  ++    K   +  IEV++   D    L+E     ++ N++
Sbjct:  329 ALQKLLNAVPEAIKGYKPVPVPARVPENKSCDPATPLKQEWMWNQVSKFLQEGDVVITETGTSAFGINQTPFPNNAYGISQVLWGSIGFTTGACLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGEKAGYNDIQNWDHLALLPTF--GAKDYENHRVATTGEWDKLTQDKEFNKNSKIRMIEVMLPVMDAPTSLIEQAKLTASINAK 562          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC6_YEAST (Pyruvate decarboxylase isozyme 3 OS=Saccharomyces cerevisiae GN=PDC6 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 3.467e-24
Identity = 80/237 (33.76%), Postives = 116/237 (48.95%), Query Frame = 1
Query:   25 ALSKRLKSNTTAYENYHRIYVPEGQPPK--CEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP---YNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 708
            AL   LK      + Y  + VP   P         PL+   L+  + K L     +I+ETG S F   +   PK      Q+ +GSIG++ GATLG A +     P KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH GP   YN I+ W++  L+ A   G  K    K+    E      ++   K   +  IE+ +   D  + L++     +A N++
Sbjct:  329 ALQNLLKVIPDVVKGYKSVPVPTKTPANKGVPASTPLKQEWLWNELSKFLQEGDVIISETGTSAFGINQTIFPKDAYGISQVLWGSIGFTTGATLGAAFAAEEIDPNKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIH-GPHAEYNEIQTWDHLALLPAF--GAKKYENHKIATTGEWDALTTDSEFQKNSVIRLIELKLPVFDAPESLIKQAQLTAATNAK 562          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC5_YEAST (Pyruvate decarboxylase isozyme 2 OS=Saccharomyces cerevisiae GN=PDC5 PE=1 SV=4)

HSP 1 Score: 110.923 bits (276), Expect = 1.009e-23
Identity = 80/237 (33.76%), Postives = 119/237 (50.21%), Query Frame = 1
Query:   25 ALSKRLKSNTTAYENYHRIYVPEGQP-PKCEPKE-PLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP---YNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 708
            AL K L +     ++Y  + VP   P  K  P   P++   ++ H+   L     VIAETG S F   +   P       Q+ +GSIG++VGA LG   +     P+KRVI  IGDGS Q+T Q++STM+R G K  IF++NN GYTIE  IH GP   YN I+ W++  L+     G     T +V    E  +  ++        +  IEV++   D  + L++     +A N++
Sbjct:  329 ALQKLLDAIPEVVKDYKPVAVPARVPITKSTPANTPMKQEWMWNHLGNFLREGDIVIAETGTSAFGINQTTFPTDVYAIVQVLWGSIGFTVGALLGATMAAEELDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYIFVLNNNGYTIEKLIH-GPHAEYNEIQGWDHLALLPTF--GARNYETHRVATTGEWEKLTQDKDFQDNSKIRMIEVMLPVFDAPQNLVKQAQLTAATNAK 562          
The following BLAST results are available for this feature:
BLAST of DY256691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PDC3_MAIZE1.378e-9783.74Pyruvate decarboxylase isozyme 3 (Fragment) OS=Zea... [more]
PDC1_TOBAC4.770e-7487.92Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nic... [more]
PDC3_SCHPO1.443e-5445.04Probable pyruvate decarboxylase C186.09 OS=Schizos... [more]
PDC_ZYMMO1.493e-5144.53Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc... [more]
PDC2_SCHPO4.345e-5142.02Probable pyruvate decarboxylase C1F8.07c OS=Schizo... [more]
PDC2_MAIZE6.274e-5086.79Pyruvate decarboxylase isozyme 2 (Fragment) OS=Zea... [more]
PDC_NEUCR1.070e-4944.54Pyruvate decarboxylase OS=Neurospora crassa GN=cfp... [more]
PDC1_CANGA1.838e-2533.47Pyruvate decarboxylase OS=Candida glabrata GN=PDC1... [more]
PDC6_YEAST3.467e-2433.76Pyruvate decarboxylase isozyme 3 OS=Saccharomyces ... [more]
PDC5_YEAST1.009e-2333.76Pyruvate decarboxylase isozyme 2 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1CC08ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256691 ID=DY256691; Name=DY256691; organism=Citrus clementina; type=EST; length=902bp
GTTTTGATGAAGGATTTCCTCAAAGCACTTTCAAAGCGGCTCAAAAGCAA
CACTACTGCTTATGAGAATTACCACAGGATTTATGTTCCTGAGGGGCAAC
CTCCGAAGTGTGAACCCAAAGAGCCCTTGAGAGTGAATGTTCTGTTCCAA
CATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGATTGCTGAGACAGG
GGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTAAGGGATGCGGGT
ATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCTGTTGGTGCTACT
CTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCATTGCTTGCATAGG
TGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAACAATGCTGCGAT
GTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGTGGTTACACCATT
GAAGTTGAGATCCATGATGGACCGTACAATGTGATCAAGAACTGGAACTA
CACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCAAGTGCTGGACAA
CCAAGGTCTTCTGCGAGGAGGAGCTCATCGAAGCCATTGAGAACGCTACT
GGACCCAAGAAGGATTGCTTGTGCTTCATTGAAGTACTTGTTCACAAGGA
TGATACAAGCAAAGAGCTTTTGGAATGGGGCTCCAGGGTCTCCGCTGCCA
ATAGCCGCCCACCAAATCCTCAGTAGATATGAGGCGGCTCATATTGCAAA
TTGCACTCTACTACCATTTATAGCCAAATTAAATGCGCGCATGTCTTTTC
TGTGGTTACTTTACTAAGTTTTGGGTATTTTGAACTATTTGCTGGTTTCT
AATGTAAATTCATTTTAAAATTTAATATCTACTAAATCCTCTCCATTGCT
TT
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