DY256691

Overview
NameDY256691
Unique NameDY256691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length902
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC1_YEAST (Pyruvate decarboxylase isozyme 1 OS=Saccharomyces cerevisiae GN=PDC1 PE=1 SV=7)

HSP 1 Score: 110.153 bits (274), Expect = 1.720e-23
Identity = 78/236 (33.05%), Postives = 117/236 (49.58%), Query Frame = 1
Query:   28 LSKRLKSNTTAYENYHRIYVPEGQPPKCE--PKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP---YNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 708
            L K L +   A + Y  + VP   P         PL+   ++  +   L     VIAETG S F   +   P       Q+ +GSIG++ GATLG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH GP   YN I+ W++  L+     G     T +V    E  +  ++ +      +  IE+++   D  + L+E     +A N++
Sbjct:  330 LQKLLTTIADAAKGYKPVAVPARTPANAAVPASTPLKQEWMWNQLGNFLQEGDVVIAETGTSAFGINQTTFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIH-GPKAQYNEIQGWDHLSLLPTF--GAKDYETHRVATTGEWDKLTQDKSFNDNSKIRMIEIMLPVFDAPQNLVEQAKLTAATNAK 562          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC1_KLUMA (Pyruvate decarboxylase OS=Kluyveromyces marxianus GN=PDC1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.440e-22
Identity = 76/215 (35.35%), Postives = 104/215 (48.37%), Query Frame = 1
Query:    1 VLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGL-----------VDAIHNGE-GKCWTTKVFCEEELIEAIE 591
            V MK  L+ L  ++K     Y+     + P    P  +   PL+   ++  + K L     V+ ETG S F   +   P       Q+ +GSIG++ GATLG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH     YN I++W +  L           V     GE  K  T K F E   I  IE
Sbjct:  324 VQMKFVLQKLLTKVKDAAKGYKPVPVPHAPRDNKPVAD-STPLKQEWVWTQVGKFLQEGDVVLTETGTSAFGINQTHFPNDTYGISQVLWGSIGFTGGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGETAQYNCIQSWKHLDLLPTFGAKDYEAVRVATTGEWNKLTTDKKFQENSKIRLIE 537          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC1_KLULA (Pyruvate decarboxylase OS=Kluyveromyces lactis GN=PDC1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.103e-21
Identity = 77/237 (32.49%), Postives = 113/237 (47.68%), Query Frame = 1
Query:   25 ALSKRLKSNTTAYENYHRIYVPEGQPPKCEP---KEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 708
            AL K L     A + Y  + VP  +P   E      PL+   ++  + + L     VI ETG S F   +   P       Q+ +GSIG++ GATLG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH     YN I+NW +  L+     G       +V    E  +   +        +  IEV++   D    L++     +A N++
Sbjct:  329 ALQKLLTKVADAAKGYKPVPVPS-EPEHNEAVADSTPLKQEWVWTQVGEFLREGDVVITETGTSAFGINQTHFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGETAQYNCIQNWQHLELLPTF--GAKDYEAVRVSTTGEWNKLTTDEKFQDNTRIRLIEVMLPTMDAPSNLVKQAQLTAATNAK 562          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: KDC_MYCTU (Alpha-keto-acid decarboxylase OS=Mycobacterium tuberculosis GN=kdc PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.044e-20
Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 1
Query:   88 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 522
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I +WN+T L  A+
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL 504          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: KDC_MYCTA (Alpha-keto-acid decarboxylase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=kdc PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.044e-20
Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 1
Query:   88 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 522
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I +WN+T L  A+
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL 504          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: KDC_MYCBP (Alpha-keto-acid decarboxylase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=kdc PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.044e-20
Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 1
Query:   88 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 522
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I +WN+T L  A+
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL 504          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: KDC_MYCBO (Alpha-keto-acid decarboxylase OS=Mycobacterium bovis GN=kdc PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.044e-20
Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 1
Query:   88 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 522
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I +WN+T L  A+
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL 504          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC_HANUV (Pyruvate decarboxylase OS=Hanseniaspora uvarum GN=PDC PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.363e-20
Identity = 71/223 (31.84%), Postives = 109/223 (48.88%), Query Frame = 1
Query:   67 NYHRIYVPEGQPPKCEPKE--PLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE----KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP---YNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 708
            NY  + VP G P      +  PL    L+  + + L     V+ ETG S F   + + P       Q+ +GSIG+SVGA +G   +  E    KRVI  +GDGS Q+T Q+++ ++R G K  IF++NN GYTIE  IH GP   YN+I+NW     +      + +    K   E + + A  +    K   +  IEV + + D    L+   +  +A N++
Sbjct:  343 NYSPVPVPAGLPKNAPVADSTPLAQEWLWNELGEFLEEGDIVVTETGTSAFGINQTRFPTDAYGISQVLWGSIGYSVGAMVGATFAAEELDKAKRVILFVGDGSLQLTVQEIACLIRWGLKPYIFVLNNNGYTIEKLIH-GPTAQYNMIQNWKQLRYLTNFGATDYEAIPVKTVGEWKKLTA--DPAFKKNSTIRLIEVFLPEMDAPSSLVAQANLTAAINAK 562          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: KDC_MYCPA (Alpha-keto-acid decarboxylase OS=Mycobacterium paratuberculosis GN=kdc PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.780e-20
Identity = 60/197 (30.46%), Postives = 108/197 (54.82%), Query Frame = 1
Query:   91 EGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLE 675
            E  PP    ++PL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A LG A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I  W +T + +A+   E   +  + +   EL +A+  A    +D +  +EV++ + +  + L+E
Sbjct:  357 EPLPPPPPREQPLTQKMVWDRVCTALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGTFAREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVGWKWTEVPNALGVTEHLAFRVQTY--GELDDAL-TAAARHQDRMVLVEVVLPRLEIPRLLVE 550          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC_ASPFU (Pyruvate decarboxylase OS=Aspergillus fumigatus GN=pdcA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.037e-20
Identity = 70/198 (35.35%), Postives = 103/198 (52.02%), Query Frame = 1
Query:  103 PKCEPK---EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWT-TKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKEL 669
            P  EPK   +P+     +  I + L     VI ETG + F   + + P G     Q+ +GSIG+SVGA  G A +  E   +R I  +GDGS Q+T Q++STM+R     IIF+I N GYTIE  IH  +  YN I+ W+Y  L  A   G GK +   +V  ++++I+  EN        L  +E+ + ++D    L
Sbjct:  362 PDDEPKSGDQPITHRWFWPKIGQWLKENDIVITETGTANFGIWETRFPAGVTAISQVLWGSIGYSVGACQGAALAAKEQGNRRTILFVGDGSIQLTLQEISTMIRNKLNPIIFVICNEGYTIERYIHGWEASYNDIQQWDYKSLPVAF--GAGKDYKGYRVKTKDDMIKLFENTEFASAPFLQLVELYMPREDAPSAL 557          
The following BLAST results are available for this feature:
BLAST of DY256691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PDC1_YEAST1.720e-2333.05Pyruvate decarboxylase isozyme 1 OS=Saccharomyces ... [more]
PDC1_KLUMA9.440e-2235.35Pyruvate decarboxylase OS=Kluyveromyces marxianus ... [more]
PDC1_KLULA2.103e-2132.49Pyruvate decarboxylase OS=Kluyveromyces lactis GN=... [more]
KDC_MYCTU1.044e-2035.57Alpha-keto-acid decarboxylase OS=Mycobacterium tub... [more]
KDC_MYCTA1.044e-2035.57Alpha-keto-acid decarboxylase OS=Mycobacterium tub... [more]
KDC_MYCBP1.044e-2035.57Alpha-keto-acid decarboxylase OS=Mycobacterium bov... [more]
KDC_MYCBO1.044e-2035.57Alpha-keto-acid decarboxylase OS=Mycobacterium bov... [more]
PDC_HANUV1.363e-2031.84Pyruvate decarboxylase OS=Hanseniaspora uvarum GN=... [more]
KDC_MYCPA1.780e-2030.46Alpha-keto-acid decarboxylase OS=Mycobacterium par... [more]
PDC_ASPFU3.037e-2035.35Pyruvate decarboxylase OS=Aspergillus fumigatus GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1CC08ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256691 ID=DY256691; Name=DY256691; organism=Citrus clementina; type=EST; length=902bp
GTTTTGATGAAGGATTTCCTCAAAGCACTTTCAAAGCGGCTCAAAAGCAA
CACTACTGCTTATGAGAATTACCACAGGATTTATGTTCCTGAGGGGCAAC
CTCCGAAGTGTGAACCCAAAGAGCCCTTGAGAGTGAATGTTCTGTTCCAA
CATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGATTGCTGAGACAGG
GGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTAAGGGATGCGGGT
ATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCTGTTGGTGCTACT
CTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCATTGCTTGCATAGG
TGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAACAATGCTGCGAT
GTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGTGGTTACACCATT
GAAGTTGAGATCCATGATGGACCGTACAATGTGATCAAGAACTGGAACTA
CACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCAAGTGCTGGACAA
CCAAGGTCTTCTGCGAGGAGGAGCTCATCGAAGCCATTGAGAACGCTACT
GGACCCAAGAAGGATTGCTTGTGCTTCATTGAAGTACTTGTTCACAAGGA
TGATACAAGCAAAGAGCTTTTGGAATGGGGCTCCAGGGTCTCCGCTGCCA
ATAGCCGCCCACCAAATCCTCAGTAGATATGAGGCGGCTCATATTGCAAA
TTGCACTCTACTACCATTTATAGCCAAATTAAATGCGCGCATGTCTTTTC
TGTGGTTACTTTACTAAGTTTTGGGTATTTTGAACTATTTGCTGGTTTCT
AATGTAAATTCATTTTAAAATTTAATATCTACTAAATCCTCTCCATTGCT
TT
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