DY256691

Overview
NameDY256691
Unique NameDY256691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length902
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC_ASPOR (Pyruvate decarboxylase OS=Aspergillus oryzae GN=pdcA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.966e-20
Identity = 66/180 (36.67%), Postives = 94/180 (52.22%), Query Frame = 1
Query:  142 LFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE--KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKEL 669
            L+  + + L  +  VI ETG + F     + P G     Q+ +GSIG+SVGA  G A +  E  +R +  +GDGSFQ+T Q+VSTM+R     IIF+I N GYTIE  IH  +  YN I+ W++  +  A    + K    KV   +EL E   N       CL  +E+ + +DD    L
Sbjct:  378 LWPTVGQWLKEKDVVITETGTANFGIWDTRFPAGVTAISQVLWGSIGYSVGACQGAALAAKEQGRRTVLFVGDGSFQLTLQEVSTMIRNNLNPIIFVICNEGYTIERYIHGWEAVYNDIQPWDFLNIPVAF-GAKDKYKGYKVTTRDELRELFANEEFASAPCLQLVELHMPRDDCPASL 556          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: DCIP_ENTCL (Indole-3-pyruvate decarboxylase OS=Enterobacter cloacae GN=ipdC PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 62/190 (32.63%), Postives = 101/190 (53.16%), Query Frame = 1
Query:   94 GQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIH-NGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDD 654
            G  P  +P   L     ++ +Q  +     ++A+ G S F    L+LP    +  Q  +GSIG+++ A  G   + P +RVI   GDG+ Q+T Q++ +MLR  Q  II ++NN GYT+E  IH  +  YN I  WN+T +  A+  + + +CW  +V   E+L + +E     ++  L  IEV++ K D
Sbjct:  349 GAIPFPQPDGSLTQENFWRTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRYNDIALWNWTHIPQALSLDPQSECW--RVSEAEQLADVLEKVAHHER--LSLIEVMLPKAD 534          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC4_SCHPO (Putative pyruvate decarboxylase C3G9.11c OS=Schizosaccharomyces pombe GN=SPAC3G9.11c PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 68/189 (35.98%), Postives = 94/189 (49.74%), Query Frame = 1
Query:  166 LSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGA----TLGYAQS-VPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIK-NWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 708
            L     V  ETG S F       PKGC    Q+ +GSIGWSVGA    TLG   S  P +R I  +GDGS  +T Q++S  +R G   IIF+INN GYTIE  IH     YN I   W+Y  L+     G     +  +  E+EL++  ++    K D +  +EV +   D  + L+E     ++ N +
Sbjct:  384 LRESDVVTTETGTSNFGILDCIFPKGCQNLSQVLWGSIGWSVGAMFGATLGIKDSDAPHRRSILIVGDGSLHLTVQEISATIRNGLTPIIFVINNKGYTIERLIHGLHAVYNDINTEWDYQNLLKGY--GAKNSRSYNIHSEKELLDLFKDEEFGKADVIQLVEVHMPVLDAPRVLIEQAKLTASLNKQ 570          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: KDC_MYCA1 (Alpha-keto-acid decarboxylase OS=Mycobacterium avium (strain 104) GN=kdc PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 58/197 (29.44%), Postives = 108/197 (54.82%), Query Frame = 1
Query:   91 EGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLE 675
            E  PP    ++PL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A LG A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I  W +T + +++   +   +  + +   EL +A+  A    +D +  +EV++ + +  + L+E
Sbjct:  357 EPLPPPPPREQPLTQKMVWDRVCTALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGTFAREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVGWKWTEVPNSLGVTDHLAFRVQTY--GELDDAL-TAAARHQDRMVLVEVVLPRLEIPRLLVE 550          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: KDC_MYCLE (Alpha-keto-acid decarboxylase OS=Mycobacterium leprae GN=kdc PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.276e-18
Identity = 60/196 (30.61%), Postives = 101/196 (51.53%), Query Frame = 1
Query:   79 IYVPEGQPPKCEPKEPLRVN--VLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDD 654
            + +P G P    P    R+   +L+  +   L+    V+A+ G +++   + +LP+G  +  Q  +GSIG+++ A LG   +   +R +  +GDG+ Q+T Q++ +  R G   +I ++NN GYTIE  IH    PYN I  W +T +  A+       +  + +   EL EA   A    KD + F+EV+V K D
Sbjct:  349 VELPPGNPTADTPSPTQRLTQQILWDRLCAALTPGNVVLADQGTAFYGMVEHRLPRGVTFIGQPLWGSIGYTLPAALGAGLAHRNRRTVLLLGDGAAQLTIQELGSFYREGLSPVIVVVNNDGYTIERAIHGATAPYNNIARWRWTDIPGALGVANHSSFRAETY--GELDEAFAVA-AELKDQMVFVEVIVPKLD 541          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: KDC_MYCUA (Alpha-keto-acid decarboxylase OS=Mycobacterium ulcerans (strain Agy99) GN=kdc PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.666e-18
Identity = 51/152 (33.55%), Postives = 86/152 (56.58%), Query Frame = 1
Query:   79 IYVPEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 522
            + VP  +P    P+  EPL   +L+  + + L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A LG A + P++R +  IGDG+ Q+T Q++    R G   +I ++NN GYT+E  IH     YN I +W +T +  A+
Sbjct:  353 VAVPPAEPGPPTPRRDEPLNQEMLWNRLCEALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGIFSREGLSPVIVVVNNDGYTVERAIHGETATYNDIVSWRWTDVPGAL 504          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC_EMENI (Pyruvate decarboxylase OS=Emericella nidulans GN=pdcA PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.712e-18
Identity = 61/161 (37.89%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  154 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCL 621
            + + L     VI ETG + F     + P G     Q+ +GSIG+SVGA  G A +  E   +R +  +GDGS Q+T Q++STM+R     IIF+I N GYTIE  IH  D  YN I+ W+  GL  A   G+G+    KV   +EL +   +       CL
Sbjct:  381 VGQWLKENDIVITETGTANFGIWDTRFPSGVTAISQVLWGSIGYSVGACQGAALAAKEQGNRRTVLWVGDGSLQLTLQEISTMIRNNLNPIIFVICNEGYTIERFIHGWDESYNDIQTWDIKGLPVAF-GGKGRYKGYKVTTRDELTKLFASEEFSSAPCL 540          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC_ASPTN (Pyruvate decarboxylase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pdcA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.712e-18
Identity = 62/181 (34.25%), Postives = 91/181 (50.28%), Query Frame = 1
Query:  142 LFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKEL 669
            L+  + + L     VI ETG + F     + P       Q+ +GSIG+SVGA  G A +  E   +R +  +GDGS Q+T Q++STM+R     I+F+I N GYTIE  IH  D  YN I+ W+  GL   +   + K    +V   +EL +   N       CL  +E+ + +DD    L
Sbjct:  378 LWPIVGQWLKERDIVITETGTANFGIWDTRFPANVTAISQVLWGSIGYSVGACQGAALAAKEQNNRRTVLFVGDGSLQLTVQEISTMIRNNLNPIVFVICNQGYTIERFIHGWDEAYNDIQPWDIKGL-PVVFGAKDKYKGYRVKTRDELTKLFANDEFNSVPCLQLVELHMPRDDAPASL 557          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: KDC_MYCS2 (Alpha-keto-acid decarboxylase OS=Mycobacterium smegmatis GN=kdc PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.361e-17
Identity = 61/210 (29.05%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   88 PEGQPPKCEPKEP-LRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 708
            P  Q P   P++  L    L+  + + L+    V+A+ G S++     +L  G  +  Q  + SIG+++ A LG   +  ++R +  IGDG+ Q+T Q++    R G   ++ ++NN GYT+E  IH     YN I  W +T L  A+  G     T +     EL +A+       +D + F+EV++ + D    L E     SAAN++
Sbjct:  349 PAPQRPAAPPRDAVLTQEALWDRLAEALTPGNVVLADQGTSFYGLAGHRLASGVTFIGQPLWASIGYTLPAALGAGLADRDRRTVLLIGDGAAQLTVQELGAFGREGLTPVVVVVNNNGYTVERAIHGVTARYNDITAWRWTELPAAL--GVPDALTFRCATYGELDDAL-TVAAETQDRMVFVEVMLERMDIPPLLGELAQSASAANAK 555          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: THI3_YEAST (Thiamine metabolism regulatory protein THI3 OS=Saccharomyces cerevisiae GN=THI3 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.560e-16
Identity = 65/217 (29.95%), Postives = 100/217 (46.08%), Query Frame = 1
Query:   82 YVPEGQPPKCEPKEPLRVNVLFQH------IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE----------KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH---DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLE 675
            Y P  QP    P+     NVL +       I         +I ETG S F   + + P       Q  +GS+G+++GA LG   +V E           RVI  +GDG+FQ+T Q++ST+++ G    IF++NN GY+++  +H   D  Y  I+ WNY GL+     G     T K+    E    I +      D +  IE+++   D  + LL+
Sbjct:  355 YQPSEQPSMMVPRPYPAGNVLLRQEWVWNEISHWFQPGDIIITETGASAFGVNQTRFPVNTLGISQALWGSVGYTMGACLGAEFAVQEINKDKFPATKHRVILFMGDGAFQLTVQELSTIVKWGLTPYIFVMNNQGYSVDRFLHHRSDASYYDIQPWNYLGLLRVF--GCTNYETKKIITVGEFRSMISDPNFATNDKIRMIEIMLPPRDVPQALLD 569          
The following BLAST results are available for this feature:
BLAST of DY256691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PDC_ASPOR3.966e-2036.67Pyruvate decarboxylase OS=Aspergillus oryzae GN=pd... [more]
DCIP_ENTCL5.180e-2032.63Indole-3-pyruvate decarboxylase OS=Enterobacter cl... [more]
PDC4_SCHPO6.765e-2035.98Putative pyruvate decarboxylase C3G9.11c OS=Schizo... [more]
KDC_MYCA18.836e-2029.44Alpha-keto-acid decarboxylase OS=Mycobacterium avi... [more]
KDC_MYCLE1.276e-1830.61Alpha-keto-acid decarboxylase OS=Mycobacterium lep... [more]
KDC_MYCUA1.666e-1833.55Alpha-keto-acid decarboxylase OS=Mycobacterium ulc... [more]
PDC_EMENI3.712e-1837.89Pyruvate decarboxylase OS=Emericella nidulans GN=p... [more]
PDC_ASPTN3.712e-1834.25Pyruvate decarboxylase OS=Aspergillus terreus (str... [more]
KDC_MYCS25.361e-1729.05Alpha-keto-acid decarboxylase OS=Mycobacterium sme... [more]
THI3_YEAST1.560e-1629.95Thiamine metabolism regulatory protein THI3 OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1CC08ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256691 ID=DY256691; Name=DY256691; organism=Citrus clementina; type=EST; length=902bp
GTTTTGATGAAGGATTTCCTCAAAGCACTTTCAAAGCGGCTCAAAAGCAA
CACTACTGCTTATGAGAATTACCACAGGATTTATGTTCCTGAGGGGCAAC
CTCCGAAGTGTGAACCCAAAGAGCCCTTGAGAGTGAATGTTCTGTTCCAA
CATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGATTGCTGAGACAGG
GGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTAAGGGATGCGGGT
ATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCTGTTGGTGCTACT
CTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCATTGCTTGCATAGG
TGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAACAATGCTGCGAT
GTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGTGGTTACACCATT
GAAGTTGAGATCCATGATGGACCGTACAATGTGATCAAGAACTGGAACTA
CACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCAAGTGCTGGACAA
CCAAGGTCTTCTGCGAGGAGGAGCTCATCGAAGCCATTGAGAACGCTACT
GGACCCAAGAAGGATTGCTTGTGCTTCATTGAAGTACTTGTTCACAAGGA
TGATACAAGCAAAGAGCTTTTGGAATGGGGCTCCAGGGTCTCCGCTGCCA
ATAGCCGCCCACCAAATCCTCAGTAGATATGAGGCGGCTCATATTGCAAA
TTGCACTCTACTACCATTTATAGCCAAATTAAATGCGCGCATGTCTTTTC
TGTGGTTACTTTACTAAGTTTTGGGTATTTTGAACTATTTGCTGGTTTCT
AATGTAAATTCATTTTAAAATTTAATATCTACTAAATCCTCTCCATTGCT
TT
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