DY256691

Overview
NameDY256691
Unique NameDY256691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length902
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC1_SCHPO (Putative pyruvate decarboxylase C13A11.06 OS=Schizosaccharomyces pombe GN=SPAC13A11.06 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.927e-16
Identity = 60/191 (31.41%), Postives = 89/191 (46.60%), Query Frame = 1
Query:  160 KMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV-----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIK-NWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 708
            + L     +I ETG + F     + PK      Q+ +GSIG+SVGA  G   +V     P++R I  +GDGS Q+T  ++ST +R   K IIF+INN GYTIE  IH     YN I   W Y  +       E    T  V    ++ +   +      D +  +E+++   D  + L+E     S  N +
Sbjct:  381 EFLKPRDVLITETGTANFGVLDCRFPKDVTAISQVLWGSIGYSVGAMFGAVLAVHDSKEPDRRTILVVGDGSLQLTITEISTCIRHNLKPIIFIINNDGYTIERLIHGLHASYNEINTKWGYQQIPKFFGAAENHFRTYCVKTPTDVEKLFSDKEFANADVIQVVELVMPMLDAPRVLVEQAKLTSKINKQ 571          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: PDC_ASPPA (Pyruvate decarboxylase OS=Aspergillus parasiticus GN=pdcA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.973e-11
Identity = 63/237 (26.58%), Postives = 105/237 (44.30%), Query Frame = 1
Query:   16 FLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPL-RVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLG--YAQ----------SVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVD---AIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELL 672
            F++ L+++L  +      +  ++      P+  P + + +    ++     L +   ++ ETG   +      LP          + SIG+ + A LG  +AQ          S+   R I  IGDGSFQ+T Q++ST++      IIFLINN GYTIE  IH  +  YN +  W Y    +   A  +GE K  T +V    +L   + ++       L  +EV + + D    L+
Sbjct:  325 FIEQLTQQLDISRIPTHKHDLVHPSLRTLPEVSPTDLVTQTGGFWKRFSPFLRTGDIILGETGTPGYGVNDFILPPQTRLFKPATWLSIGYMLPAALGASHAQRDLVASDQYHSLSNPRTILFIGDGSFQMTVQELSTIIHQKLNVIIFLINNDGYTIERCIHGRNQAYNDVAPWRYLKAAEFFGADQDGEYKASTWEVRTWADLDRVLNDSQLADGKGLRMVEVFMERLDAPDVLM 561          
BLAST of DY256691 vs. ExPASy Swiss-Prot
Match: ARO10_YEAST (Transaminated amino acid decarboxylase OS=Saccharomyces cerevisiae GN=ARO10 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.577e-11
Identity = 67/242 (27.69%), Postives = 114/242 (47.11%), Query Frame = 1
Query:   28 LSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQ-HIQK----MLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEK----------------RVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP---YNVIKNWNYTGLVDAIHNGEGKCW-TTKVFCEEEL---IEAIENATGPKKDCLCFIEVLVHKDDTSKEL 669
            LS +  SN T Y N         +  + E     + +++ Q H+QK     L+    V+ ETG   F+ +    P    Y  Q  + SIG ++ A LG   ++ +                 R+I   GDG+ Q+T Q++ST+L+C     + + NN GYTIE  I  GP   YN + +W +T L +A  + +GK   +T + C  +L   +E ++N+   K+  +  +EV + + D  ++L
Sbjct:  392 LSLQYDSNVTQYTN---------ETMRLEDPTNGQSSIITQVHLQKTMPKFLNPGDVVVCETGSFQFSVRDFAFPSQLKYISQGFFLSIGMALPAALGVGIAMQDHSNAHINGGNVKEDYKPRLILFEGDGAAQMTIQELSTILKCNIPLEVIIWNNNGYTIERAIM-GPTRSYNDVMSWKWTKLFEAFGDFDGKYTNSTLIQCPSKLALKLEELKNSN--KRSGIELLEVKLGELDFPEQL 621          
The following BLAST results are available for this feature:
BLAST of DY256691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PDC1_SCHPO5.927e-1631.41Putative pyruvate decarboxylase C13A11.06 OS=Schiz... [more]
PDC_ASPPA1.973e-1126.58Pyruvate decarboxylase OS=Aspergillus parasiticus ... [more]
ARO10_YEAST2.577e-1127.69Transaminated amino acid decarboxylase OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1CC08ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256691 ID=DY256691; Name=DY256691; organism=Citrus clementina; type=EST; length=902bp
GTTTTGATGAAGGATTTCCTCAAAGCACTTTCAAAGCGGCTCAAAAGCAA
CACTACTGCTTATGAGAATTACCACAGGATTTATGTTCCTGAGGGGCAAC
CTCCGAAGTGTGAACCCAAAGAGCCCTTGAGAGTGAATGTTCTGTTCCAA
CATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGATTGCTGAGACAGG
GGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTAAGGGATGCGGGT
ATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCTGTTGGTGCTACT
CTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCATTGCTTGCATAGG
TGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAACAATGCTGCGAT
GTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGTGGTTACACCATT
GAAGTTGAGATCCATGATGGACCGTACAATGTGATCAAGAACTGGAACTA
CACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCAAGTGCTGGACAA
CCAAGGTCTTCTGCGAGGAGGAGCTCATCGAAGCCATTGAGAACGCTACT
GGACCCAAGAAGGATTGCTTGTGCTTCATTGAAGTACTTGTTCACAAGGA
TGATACAAGCAAAGAGCTTTTGGAATGGGGCTCCAGGGTCTCCGCTGCCA
ATAGCCGCCCACCAAATCCTCAGTAGATATGAGGCGGCTCATATTGCAAA
TTGCACTCTACTACCATTTATAGCCAAATTAAATGCGCGCATGTCTTTTC
TGTGGTTACTTTACTAAGTTTTGGGTATTTTGAACTATTTGCTGGTTTCT
AATGTAAATTCATTTTAAAATTTAATATCTACTAAATCCTCTCCATTGCT
TT
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