DY256759
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT2_SOLTU (Actin-46 (Fragment) OS=Solanum tuberosum PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25 Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 3 Query: 3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 179 NIVLSGGSTMFPGIADRMSKEI ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ Sbjct: 278 NIVLSGGSTMFPGIADRMSKEIQALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT4_SOLTU (Actin-65 (Fragment) OS=Solanum tuberosum PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 3 Query: 3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 176 NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ Sbjct: 279 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 336
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT1_SOLTU (Actin-42 (Fragment) OS=Solanum tuberosum PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 3 Query: 3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 179 NIVLSGG+TMFPGIADRMSKEITALAP SMKIKVVAPPERKYSVWIGGSILASLSTFQQ Sbjct: 274 NIVLSGGTTMFPGIADRMSKEITALAPCSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 332
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ARPM1_MOUSE (Actin-related protein M1 homolog OS=Mus musculus GN=Arpm1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25 Identity = 49/80 (61.25%), Postives = 66/80 (82.50%), Query Frame = 3 Query: 3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242 NI+LSGGST FPG+ R+ K++ LAP++ ++V+APPERK SVW+GGSILASLS FQ MWI+ E++E GP+IVH++CF Sbjct: 290 NIILSGGSTSFPGLDKRLIKDVAKLAPANTAVQVIAPPERKISVWMGGSILASLSAFQDMWITAAEFEEVGPNIVHQRCF 369
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT_CALFI (Actin (Fragment) OS=Calanus finmarchicus PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.298e-24 Identity = 52/61 (85.25%), Postives = 59/61 (96.72%), Query Frame = 3 Query: 3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMW 185 N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMW Sbjct: 218 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 278
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTY_DICDI (Centractin OS=Dictyostelium discoideum GN=arpA PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24 Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 3 Query: 3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242 NI+L GGST+F G DR+ E+ LAP +KIK+ APPERKYS W+GGSILASLSTF+ +W+++ EY+E G S++HRK F Sbjct: 304 NIILGGGSTLFQGFGDRLLNEVKKLAPKDIKIKITAPPERKYSAWMGGSILASLSTFKDLWVTRQEYEEDGCSVIHRKIF 383
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT9_SOLTU (Actin-82 (Fragment) OS=Solanum tuberosum PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24 Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 3 Query: 3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 179 NIVLSGG+TMF GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ Sbjct: 278 NIVLSGGTTMFNGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT2_TOBAC (Actin-53 (Fragment) OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24 Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 3 Query: 3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 179 N+VLSGGSTMFPGI DRMSKEI+ALAP+SMKIKVVAPPERKYSVWIGGSILASLSTFQQ Sbjct: 278 NVVLSGGSTMFPGITDRMSKEISALAPNSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT_EUPCR (Actin, cytoplasmic OS=Euplotes crassus PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24 Identity = 50/79 (63.29%), Postives = 64/79 (81.01%), Query Frame = 3 Query: 3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 239 NI+LSGG+TMFPG+ +R+ KE+ LAP +MK+KV+A P+RKY+VW GGS LA LSTF MW++K +Y E G SIVHRKC Sbjct: 300 NIILSGGTTMFPGLGERLYKEMKDLAPQTMKVKVIASPDRKYAVWRGGSTLAKLSTFAGMWVTKEDYAEFGESIVHRKC 378
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT4_SOLLC (Actin-105 (Fragment) OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 3 Query: 3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 179 N+VLSGGSTMFPGI DRMSKE TALAPSSMKIKVVAPPE KYSVWIGGSILASLSTFQQ Sbjct: 278 NVVLSGGSTMFPGITDRMSKEFTALAPSSMKIKVVAPPESKYSVWIGGSILASLSTFQQ 336 The following BLAST results are available for this feature:
BLAST of DY256759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY256759 ID=DY256759; Name=DY256759; organism=Citrus clementina; type=EST; length=690bpback to top |