DY256759

Overview
NameDY256759
Unique NameDY256759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTG_RANLE (Actin, cytoplasmic 2 OS=Rana lessonae GN=actg1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTG_MOUSE (Actin, cytoplasmic 2 OS=Mus musculus GN=Actg1 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTG_HUMAN (Actin, cytoplasmic 2 OS=Homo sapiens GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTG_CHICK (Actin, cytoplasmic 2 OS=Gallus gallus GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTG_CEPAC (Actin, gamma OS=Cephalosporium acremonium GN=ACT PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 70/80 (87.50%), Postives = 78/80 (97.50%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIV+SGG+TM+PG++DRM KEITALAPSSMK+K++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  296 NIVMSGGTTMYPGLSDRMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTG_BOVIN (Actin, cytoplasmic 2 OS=Bos taurus GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTG_ANSAN (Actin, cytoplasmic 2 OS=Anser anser anser GN=ACTG1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTC_PISOC (Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 72/80 (90.00%), Postives = 76/80 (95.00%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            N VLSGGSTMFPGIADRM KE+TALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  297 NTVLSGGSTMFPGIADRMQKEVTALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTB_XENTR (Actin, cytoplasmic 1 OS=Xenopus tropicalis GN=actb PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACTB_XENLA (Actin, cytoplasmic 1 OS=Xenopus laevis GN=actb PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
The following BLAST results are available for this feature:
BLAST of DY256759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 413
Match NameE-valueIdentityDescription
ACTG_RANLE1.930e-3690.00Actin, cytoplasmic 2 OS=Rana lessonae GN=actg1 PE=... [more]
ACTG_MOUSE1.930e-3690.00Actin, cytoplasmic 2 OS=Mus musculus GN=Actg1 PE=1... [more]
ACTG_HUMAN1.930e-3690.00Actin, cytoplasmic 2 OS=Homo sapiens GN=ACTG1 PE=1... [more]
ACTG_CHICK1.930e-3690.00Actin, cytoplasmic 2 OS=Gallus gallus GN=ACTG1 PE=... [more]
ACTG_CEPAC1.930e-3687.50Actin, gamma OS=Cephalosporium acremonium GN=ACT P... [more]
ACTG_BOVIN1.930e-3690.00Actin, cytoplasmic 2 OS=Bos taurus GN=ACTG1 PE=1 S... [more]
ACTG_ANSAN1.930e-3690.00Actin, cytoplasmic 2 OS=Anser anser anser GN=ACTG1... [more]
ACTC_PISOC1.930e-3690.00Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1[more]
ACTB_XENTR1.930e-3690.00Actin, cytoplasmic 1 OS=Xenopus tropicalis GN=actb... [more]
ACTB_XENLA1.930e-3690.00Actin, cytoplasmic 1 OS=Xenopus laevis GN=actb PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AB02ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256759 ID=DY256759; Name=DY256759; organism=Citrus clementina; type=EST; length=690bp
GTAACATTGTTCTCAGTGGGGGTTCAACTATGTTCCCCGGTATTGCCGAC
CGTATGAGCAAGGAAATCACAGCACTTGCTCCAAGCAGCATGAAGATCAA
GGTCGTGGCTCCACCAGAGAGAAAATACAGTGTTTGGATTGGAGGATCAA
TCCTTGCATCCCTCAGCACCTTCCAGCAGATGTGGATCTCAAAGGGCGAG
TATGATGAGTCTGGTCCATCCATTGTCCACAGGAAATGCTTCTAAGTTCT
TTAAGTGCTTGATGGGTGAGTTCTTTTTTTCCATTTAGTTGGTTTTTTGT
GTCTCGTTTCGCGAACTCAAGTTGGTTGACATGGAGAAGTGCTAAGGTTG
GGGCCATTGAAGGAGGCATATCTCGATATTGATGTTATTATACAAGCTTC
TTACAGCGTTTGAGGGGGGCTTATTTCTGTACTCAACCGTCTTCCTTGCC
TTGCATTCATCTGGTGTTCAACCAAGTCTTTTTTCTTTTTTTTCCTTTTT
TTTTTTTAAAGTAGGATGTTTGTAGCTGGAGATGAAGAGTGGTTGTGATG
CTTTTCTATTTCATTTTCTAAATTTTCATATTTGAAGGTTTTTTTTCTCC
CCCTCTCAAAAGGAACATTAATGTTAATAGCTATTGTATGAGAAAACTTT
AATTAGTGTCAGCTTGCAGTCATAAATTTGGTTATTAAAA
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