DY256813

Overview
NameDY256813
Unique NameDY256813
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length953
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256813 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAM (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 3
Query:  309 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDAGLYDPLEE------EDEDFYGF-------MQEMVSMM--------NNVKDEGDSFEDLQRTFVEMVDGMSFDFNYDPTDAQKARVNTSKGKAAKRGTSR 743
            YY +LGI KDAS  +I+ AY KL+ K+HPD + K  G    A  +F++I EAY VLSD+NKR+ YD   +D  +          DF GF        +++ S           N   +GD   DLQ T     +   F    + +  +     T  G  AK GTS+
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDIN-KEEG----ADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD---DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSK 163          
BLAST of DY256813 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 3
Query:  309 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDAGLYDPLEE------EDEDFYGF-------MQEMVSMM--------NNVKDEGDSFEDLQRTFVEMVDGMSFDFNYDPTDAQKARVNTSKGKAAKRGTSR 743
            YY +LGI KDAS  +I+ AY KL+ K+HPD + K  G    A  +F++I EAY VLSD+NKR+ YD   +D  +          DF GF        +++ S           N   +GD   DLQ T     +   F    + +  +     T  G  AK GTS+
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDIN-KEEG----ADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD---DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSK 163          
BLAST of DY256813 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein dnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 3
Query:  309 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDAGLYDPLEE------EDEDFYGF-------MQEMVSMM--------NNVKDEGDSFEDLQRTFVEMVDGMSFDFNYDPTDAQKARVNTSKGKAAKRGTSR 743
            YY +LGI KDAS  +I+ AY KL+ K+HPD + K  G    A  +F++I EAY VLSD+NKR+ YD   +D  +          DF GF        +++ S           N   +GD   DLQ T     +   F    + +  +     T  G  AK GTS+
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDIN-KEEG----ADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD---DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSK 163          
BLAST of DY256813 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 3
Query:  309 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDAGLYDPLEE------EDEDFYGF-------MQEMVSMM--------NNVKDEGDSFEDLQRTFVEMVDGMSFDFNYDPTDAQKARVNTSKGKAAKRGTSR 743
            YY +LGI KDAS  +I+ AY KL+ K+HPD + K  G    A  +F++I EAY VLSD+NKR+ YD   +D  +          DF GF        +++ S           N   +GD   DLQ T     +   F    + +  +     T  G  AK GTS+
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDIN-KEEG----ADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD---DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSK 163          
BLAST of DY256813 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 3
Query:  309 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDAGLYDPLEE------EDEDFYGF-------MQEMVSMM--------NNVKDEGDSFEDLQRTFVEMVDGMSFDFNYDPTDAQKARVNTSKGKAAKRGTSR 743
            YY +LGI KDAS  +I+ AY KL+ K+HPD + K  G    A  +F++I EAY VLSD+NKR+ YD   +D  +          DF GF        +++ S           N   +GD   DLQ T     +   F    + +  +     T  G  AK GTS+
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDIN-KEEG----ADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD---DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSK 163          
BLAST of DY256813 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 3
Query:  309 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDAGLYDPLEE------EDEDFYGF-------MQEMVSMM--------NNVKDEGDSFEDLQRTFVEMVDGMSFDFNYDPTDAQKARVNTSKGKAAKRGTSR 743
            YY +LGI KDAS  +I+ AY KL+ K+HPD + K  G    A  +F++I EAY VLSD+NKR+ YD   +D  +          DF GF        +++ S           N   +GD   DLQ T     +   F    + +  +     T  G  AK GTS+
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDIN-KEEG----ADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD---DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSK 163          
BLAST of DY256813 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA2 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 3
Query:  309 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDAGLYDPLEE------EDEDFYGF-------MQEMVSMM--------NNVKDEGDSFEDLQRTFVEMVDGMSFDFNYDPTDAQKARVNTSKGKAAKRGTSR 743
            YY +LGI KDAS  +I+ AY KL+ K+HPD + K  G    A  +F++I EAY VLSD+NKR+ YD   +D  +          DF GF        +++ S           N   +GD   DLQ T     +   F    + +  +     T  G  AK GTS+
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDIN-KEEG----ADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD---DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSK 163          
BLAST of DY256813 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA1 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 3
Query:  309 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDAGLYDPLEE------EDEDFYGF-------MQEMVSMM--------NNVKDEGDSFEDLQRTFVEMVDGMSFDFNYDPTDAQKARVNTSKGKAAKRGTSR 743
            YY +LGI KDAS  +I+ AY KL+ K+HPD + K  G    A  +F++I EAY VLSD+NKR+ YD   +D  +          DF GF        +++ S           N   +GD   DLQ T     +   F    + +  +     T  G  AK GTS+
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDIN-KEEG----ADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD---DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSK 163          
BLAST of DY256813 vs. ExPASy Swiss-Prot
Match: DNAJ_SALRD (Chaperone protein dnaJ OS=Salinibacter ruber (strain DSM 13855) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  309 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFMQEMVSMMNNVKDEGDSFEDL 620
            YY ILG+ +DAS  +I+ AY K AM++HPDR+  +P    EA+++F++  EAY VLSD  KR  YD   +D +   D    G  +      ++++D  D+F D+
Sbjct:    5 YYDILGVDEDASDKEIKKAYRKKAMEYHPDRNPDDP----EAEQKFKEASEAYEVLSDPEKRQRYDQFGHDGV---DSGAGGGRRGRGRGFHDIEDIFDAFSDI 101          
BLAST of DY256813 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMF (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.252e-11
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  309 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYD 506
            +YA LG+ + A+  +I+ AY KLAMK+HPDR+  N     EA+ +F+++Q+AY  LSD+ KR+MYD
Sbjct:    6 FYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNK----EAEEKFKEVQKAYETLSDKEKRAMYD 67          
The following BLAST results are available for this feature:
BLAST of DY256813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
DNAJ_STAAM1.252e-1133.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAE1.252e-1133.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAC1.252e-1133.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA91.252e-1133.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA81.252e-1133.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA31.252e-1133.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA21.252e-1133.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA11.252e-1133.73Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_SALRD1.252e-1138.46Chaperone protein dnaJ OS=Salinibacter ruber (stra... [more]
DNAJ_NEIMF1.252e-1148.48Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2BD04ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256813 ID=DY256813; Name=DY256813; organism=Citrus clementina; type=EST; length=953bp
GCGGGGGTCTCTCTTCCCTTCATCACCCGTACAGTCGTCAATAATCCCCT
TTTAAGTCTCTAAACGCAACACATACCCAGGAGGTGAGAAGGATTAAAAA
AAAAAAAACAATTAAAAAAAAGGAGAAACCAAAAAATTCCTTTATTTTTC
TCTGCTTTATCAATCCTCCAAATGCTCTCTTCATAACAGTTTGTTTCCGT
TTCTTCATATGATTTTATCTTGACAAGCATATTACATCCTTATTGCTGTT
TTCTTTTTTGGTTGCTGTGATGGATGGAGGAGGAGGATCCAACGGCGGAT
CTTTGAGCTACTACGCGATTCTTGGGATTCGCAAGGACGCCTCCTTCTCT
GACATTCGCTCCGCTTATCACAAGCTCGCCATGAAATGGCATCCGGATAG
GAGTGCGAAGAACCCGGGAGTGGCCGGGGAAGCCAAACGCCGGTTTCAGC
AAATTCAAGAAGCTTACTCCGTCCTCTCGGATGAGAACAAGAGGTCAATG
TACGATGCTGGACTTTATGATCCCCTTGAGGAAGAAGATGAGGACTTCTA
TGGTTTTATGCAAGAGATGGTCTCCATGATGAATAATGTTAAAGACGAGG
GGGACAGTTTTGAGGACCTCCAAAGGACGTTCGTGGAAATGGTGGATGGG
ATGAGCTTCGACTTTAATTATGATCCTACGGATGCGCAAAAAGCACGTGT
CAACACATCAAAGGGTAAAGCGGCCAAGCGCGGTACTTCTCGTTGCTGAC
AATCGCTCTGGATCATCTCTGATCATTTCAGCTAATGATGATGTTGTTTA
TCAATTCCCCCCATTTTGTTCTAAATCTCAAATTAATCCCCATGTTGGGG
GTTGGTAGTTTTAAGAAATTTTTTTTTTTTTTTAATCCCCCGGGGGGGTA
GCATTTTGGACCTGAAAACTTTCCTTAAAAAATAAAATCCCTTTTTAAGG
TAA
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