DY256843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.682e-15 Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKY 467 MGR K++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF+ KL+++ S+ M K L KY Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST-DMDKVLLKY 69
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MEF2D_MOUSE (Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.682e-15 Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKY 467 MGR K++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF+ KL+++ S+ M K L KY Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST-DMDKVLLKY 69
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MEF2D_HUMAN (Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.682e-15 Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKY 467 MGR K++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF+ KL+++ S+ M K L KY Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST-DMDKVLLKY 69
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 8.202e-15 Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCS 479 MGR K+++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF+S +L+++ S+ M + L KY S Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST-DMDRVLLKYTEYS 73
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.071e-14 Identity = 41/70 (58.57%), Postives = 56/70 (80.00%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKY 467 M R + E++RIE+ RQVTF+KRR GL KKA EL+VLCDA+VAL++FSS GKL +F SS +M++ ++KY Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASS-NMNEIIDKY 69
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MEF2B_MOUSE (Myocyte-specific enhancer factor 2B OS=Mus musculus GN=Mef2b PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.399e-14 Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCS 479 MGR K+++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD ++ALIIF+S +L+++ SS M + L KY S Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCDIALIIFNSAQRLFQYASS-DMDRVLLKYTEYS 73
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.944e-14 Identity = 52/153 (33.99%), Postives = 78/153 (50.98%), Query Frame = 3 Query: 336 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSP-SMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEINAA 791 GLLKKA EL++LCDA++ +IIFSS GK++EF S P SM + +++Y++ L N + Q Y E ++K + + LQ R F +VRS K + +L L+RKE ML E N L +++ +AA Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQK-----LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNRELYRVIQDHHAA 149
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: RLM1_YEAST (Transcription factor RLM1 OS=Saccharomyces cerevisiae GN=RLM1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.502e-11 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCS 434 MGR K+E++RI + NR VTF KR+ GL KKA+ELSVLC ++A+II S YEF S Sbjct: 1 MGRRKIEIQRISDDRNRAVTFIKRKAGLFKKAHELSVLCQVDIAVIILGSNNTFYEFSS 59
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: PVG4_SCHPO (MADS-box transcription factor pvg4 OS=Schizosaccharomyces pombe GN=pvg4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.186e-11 Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMH-----KTLEKYE---RCSYGTLQANHQSAKETQASYEEYIKLKEKH 563 MGR K+ + I + +R VTF KR+ GL KKAYEL+VL D EVA+ + +G+L+ FCSS TL YE R + + S + + + L KH Sbjct: 1 MGRKKISIAPITDDRSRSVTFVKRKQGLYKKAYELAVLADCEVAVTVIDRKGRLHVFCSSDYQRTLQQLNTLSIYELKNRSHFSSSPVEESSTVSPETTTGSFTPLNNKH 110
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.385e-11 Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKL----------KEKHEALQHLQRQ 590 +GR K+ + +I+ + +RQVTF+KRR GL KKA EL LC AE+ +I+FS K + F PS+ L++Y + +L + Q AS E ++L K+K +A++ ++++ Sbjct: 62 IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF-GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKE 181 The following BLAST results are available for this feature:
BLAST of DY256843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256843 ID=DY256843; Name=DY256843; organism=Citrus clementina; type=EST; length=1280bpback to top |