DY256843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 2.453e-35 Identity = 100/252 (39.68%), Postives = 139/252 (55.16%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASY-EEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKL-EEINAARRSHPWAAEEQNIPYSNQPAHSEGSFGHLHSNGTLHLGHNPGVTAHE-KTVATSKTRCSQLNFQAGML*AIN 1004 MGRGKV+LKRIENKINRQVTF+KRR+GLLKKA E+SVLCDAEVALIIFS++GKLYE+ + M K LE+YER SY + + +TQ ++ EY KLK K E +Q Q+ +RS K++ L+ ++ELQRKE+ L E N +L +L E+ ++ W +Q P Q + S SF + T ++ + P + VA + + ++ ML IN Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAE-KVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQW---DQTQP---QTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAGQPQHVRIGLPPWMLSHIN 245
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 7.136e-35 Identity = 91/212 (42.92%), Postives = 121/212 (57.08%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEINAARRSHP--WAAEEQNIPYSNQPAHSEGSFGHLHSN 887 MGRG+VE+KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF S + T+E+Y RC Y +N++ + TQ+ +E KLK K+E+L R R KT+ ++++ +L++KE L + N L +K E A ++ WA ++ + P +SE H N Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSVGIESTIERYNRC-YNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTFQDLWANSAASV--AGDPNNSEFPVEPSHPN 208
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.542e-34 Identity = 98/252 (38.89%), Postives = 138/252 (54.76%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASY-EEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKL-EEINAARRSHPWAAEEQNIPYSNQPAHSEGSFGHLHSNGTLHLGHNPGVTAHE-KTVATSKTRCSQLNFQAGML*AIN 1004 MGRGKV+LKRIEN INRQVTF+KRR+GLLKKA E+SVLCDAEVALIIFS++GKLY++ + M K LE+YER SY + + +TQ ++ EY KLK K E +Q Q+ +RS K++ L+ ++ELQRKE+ L E N +L +L E+ ++ W +Q P Q + S SF + T ++ + P + VA + + ++ ML IN Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAE-KVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQW---DQTQP---QTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAGQPQHVRIGLPPWMLSHIN 245
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.542e-34 Identity = 83/197 (42.13%), Postives = 115/197 (58.38%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEINAARRSHPWAAEEQNIPYSNQP 848 MGRG+V+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS +GKL+E+ + M K LE+YER SY Q + EY +LK K E L+ QR + +RS K + D ++ELQRKE+ + E N++LS +++E R+ ++QN ++ P Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNHGHNMPP 197
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.030e-33 Identity = 80/173 (46.24%), Postives = 106/173 (61.27%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLE 776 MGRG V+L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+FS++GKLYEF S SM LE+Y+R S+ + ++ + +EY LK K +ALQ QRQ +RS K + + +SELQ+KE+ L NN+L +E Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLME 173
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 1.030e-33 Identity = 80/173 (46.24%), Postives = 106/173 (61.27%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLE 776 MGRG V+L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+FS++GKLYEF S SM LE+Y+R S+ + ++ + +EY LK K +ALQ QRQ +RS K + + +SELQ+KE+ L NN+L +E Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLME 173
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 1.346e-33 Identity = 87/212 (41.04%), Postives = 119/212 (56.13%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQA----NHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEINAARRSHPWAAEEQNIPYSNQPAHSEGSFGHLH 881 MGRG+VELKRIENKINRQVTF+KRR GLLKKA E+SVLCDAEV+LI+FS +GKL+E+ S M K LE+YER SY Q +H +A+ + EY +LK K E L+ QR + +RS K + + L+ LQRKE+ + E N++L+ +++E R+ E+ N + P HL+ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSM--EYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLNRSVDDVPQPQPFQHPHLY 210
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 2.998e-33 Identity = 80/197 (40.61%), Postives = 115/197 (58.38%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEINAARRSHPWAAEEQNIPYSNQP 848 MGRG+V+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS +GKL+E+ + M K LE+YER SY Q + EY +LK K E L+ QR + +R+ K + + ++ELQ+KE+ + E N++LS +++E R+ ++QN ++ P Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNQGHNMPP 197
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 6.679e-33 Identity = 76/174 (43.68%), Postives = 108/174 (62.07%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEE 779 MGRG+V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVAL+IFSS+GKL+E+ + M K LE+Y+R Y Q + +++ E+ KLK + E L+ +R F +RS K + + +S LQ+K+++L + NN L K++E Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKE 174
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 8.723e-33 Identity = 82/175 (46.86%), Postives = 105/175 (60.00%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASY-EEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEE 779 MGRGKV+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ + M K LE+YER SY +A + E++ ++ EY KLK K E +Q + + S K+ L+ +SELQ+KE L E N L +L E Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAE-KALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174 The following BLAST results are available for this feature:
BLAST of DY256843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256843 ID=DY256843; Name=DY256843; organism=Citrus clementina; type=EST; length=1280bpback to top |