DY256843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.033e-25 Identity = 60/107 (56.07%), Postives = 81/107 (75.70%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQH 578 MGRGK+E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ ++ S+ T+E+Y++ + T + + Q +E KL+++ +LQ+ Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN-SVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQN 106
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 1.349e-25 Identity = 74/200 (37.00%), Postives = 100/200 (50.00%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYG-------TLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEINAARRSHPWAAEEQNIPY 836 M RGK++LKRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ ++IFS +GKL+E + +M ++KY +C+ G T A Q +E LK++ E LQ F Q+RS K L ++ L+ KE +L N L K+EE N + +A E N Y Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEKIEENNNSILDANFAVMETNYSY 200
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.491e-24 Identity = 75/202 (37.13%), Postives = 108/202 (53.47%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEINAARRSHPWAAEEQNIPYSNQPAHSEG 863 M RGK ++KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEV+LIIFS +GKLYEF SS +M T+++Y R + + S + Q E + +K E L+ +R+ +R+ KT+ +++ +L++KE+ L N LS K W + E + +SN+ S G Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS-NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK------------WGSHESEV-WSNKNQESTG 188
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.544e-24 Identity = 70/171 (40.94%), Postives = 100/171 (58.48%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMK 770 M RGK E+KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVAL+IFS R KLYEF SS S+ T+E+Y+R + NH+ +Q + +E L +K E L+ +R+ ++R+ K + +++ +L+ +E L++ N L K Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEF-SSSSIAATIERYQR-RIKEIGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.263e-23 Identity = 66/174 (37.93%), Postives = 99/174 (56.90%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEE 779 M RGKV+++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFSS+GKL+E ++ +MH +E+Y+ G Q + + Q + + L+E+ + LQ R + Q+R+ K + ++ L+ KE +L EAN +L K++E Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGG-QMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKE 173
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.263e-23 Identity = 65/176 (36.93%), Postives = 97/176 (55.11%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSY--GTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEE 779 MGRG++E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ ++ ++ T+++Y++ T A Q +E KL+ + + LQ+ + ++R+ K +++ + ++E L N L K+ E Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAE 176
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.813e-23 Identity = 63/170 (37.06%), Postives = 98/170 (57.65%), Query Frame = 3 Query: 249 ILIMGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSP-SMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANN 755 ++IMGRGK+E+KRIENK +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFSS+GKL+E+CS P SM + + +Y + + +L + Y+E K++ LQ +++ ++R+ K ++ L++ E+ML + N+ Sbjct: 1 MIIMGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASLPVEDNRVQ----LYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENH 166
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 4.798e-23 Identity = 72/190 (37.89%), Postives = 103/190 (54.21%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEINAARRSHPWAAEEQN 827 M RGK ++KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+ S KT+E+Y + + N ++ + + L +K EAL+ +R+ +R KT+ +++++L+ KE L + N L K + AE++N Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA-STQKTIERYRTYTKENI-GNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKNQPPLSAPLTVRAEDEN 188
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 4.798e-23 Identity = 69/179 (38.55%), Postives = 99/179 (55.31%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSS-PSMHKTLEKYER---CSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEI 782 MGRGKV+++RIEN+++RQVTF+KRR GLLKKA+E++VLCD +VA I+FS++G L+ + SS +M + LEKY+R S G E SY ++IKL+ + EAL+ QR +RS RKE++L+E N IL K+ E+ Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSY-DHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRS--------------RKEKLLMEKNTILEKKITEL 164
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 6.266e-23 Identity = 64/175 (36.57%), Postives = 98/175 (56.00%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCS-SPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEE 779 MGRGK+E+KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFSS GK++E+CS + S+ + +E+Y+ + ++ + Q E ++K + E L+ R++ +VR+ K + +L L+RKE++L + N L + E Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHAT----NSHFEEINHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINE 171 The following BLAST results are available for this feature:
BLAST of DY256843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256843 ID=DY256843; Name=DY256843; organism=Citrus clementina; type=EST; length=1280bpback to top |