DY256843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.069e-22 Identity = 69/201 (34.33%), Postives = 104/201 (51.74%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEINAARRSHPWAAEEQNIPYSNQPAHSE 860 M RGKV+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS+ GKLY+ ++ +M + +E+Y+ S QAN + E + +E + + L+ + +RS K + + ++ L+ KE ML AN IL K+ E N A++QN +S P E Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSAS--GEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLIDVGMMVADQQNGHFSTVPLLEE 199
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.069e-22 Identity = 69/201 (34.33%), Postives = 104/201 (51.74%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEINAARRSHPWAAEEQNIPYSNQPAHSE 860 M RGKV+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS+ GKLY+ ++ +M + +E+Y+ S QAN + E + +E + + L+ + +RS K + + ++ L+ KE ML AN IL K+ E N A++QN +S P E Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSAS--GEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLIDVGMMVADQQNGHFSTVPLLEE 199
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.381e-22 Identity = 64/175 (36.57%), Postives = 96/175 (54.86%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCS-SPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEE 779 MGRGK+E+KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFSS GK++E+CS + S+ + +E Y+ + + + Q + E +++ + E L R+F +VR+ K + +L L+RKE +L + N+ L + E Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVT----NTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINE 171
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.381e-22 Identity = 57/106 (53.77%), Postives = 73/106 (68.87%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQ 575 MGRGK+E+KRIEN +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS GKL+E+ SS M +TL +Y + + E ++ KL+EKH LQ Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRYGNHQSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQ 105
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 5.304e-22 Identity = 64/131 (48.85%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGT-------LQANHQSAKETQASYEEYIKLKEKH-------------EALQHLQRQ 590 MGRGK+E+KRIEN +RQVTF+KRR GLLKKA+ELSVLCDAEVA+I+FS GKL+EF SS SM KTL +Y + N + E +E L+EKH + LQHL++Q Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEF-SSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQ 130
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 6.928e-22 Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQA-NHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLE 776 MGR K+E+KRIENK +RQVTF+KRRNGL++KA +LSVLCDA VAL++ S+ GKLY F S ++ K L++Y + L+A +HQS S+ E ++L + +++ R+ KT L + L+ KE+ML E N +L+ ++E Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKN---------VSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVLASQME 165
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.633e-21 Identity = 49/72 (68.06%), Postives = 62/72 (86.11%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCS-SPSMHKTLEKYE 470 MGRGK+E+KRIEN NRQVTF+KRR+G+LKKA E+SVLCDAEV ++IFSS GKLY++CS S+ + LEKY+ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQ 72
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.633e-21 Identity = 61/157 (38.85%), Postives = 85/157 (54.14%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRK 728 MGRGK+E+KRI+N +RQVTF+KRR+GL KKA ELS+LCDAEV L++FSS +LY+F SS SM +E+Y Q + S+ E + +E L+++ LQ RQ +R K +D++ EL RK Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS-SMKSIIERYNETKEDPHQTMNASS-EAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 3.438e-21 Identity = 64/176 (36.36%), Postives = 95/176 (53.98%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEIN 785 MGRGK+ ++RI++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSS GKLY+F SS SM +++Y + Q + A E + E L+++ ALQ RQ +R K + ++ EL +K ++ + N LS K++ I+ Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS-SMKSVIDRYNKSKIEQQQLLN-PASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIH 174
BLAST of DY256843 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 5.865e-21 Identity = 65/175 (37.14%), Postives = 93/175 (53.14%), Query Frame = 3 Query: 258 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHKTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQFFXXXXXXXXXXXXXXXXXXXXXXXGQVRSLKTRNQLDKLSELQRKEEMLLEANNILSMKLEEI 782 MGRGK+ ++RI+N +RQVTF+KRRNG+ KKA EL++LCDAEV L+IFSS G+LYE+ SS SM +++Y + S QA E + E L+++ LQ RQ VR+ K +D++ EL RK ++ + N L K+ I Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY-SSTSMKSVIDRYGK-SKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLI 173 The following BLAST results are available for this feature:
BLAST of DY256843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256843 ID=DY256843; Name=DY256843; organism=Citrus clementina; type=EST; length=1280bpback to top |