DY256853

Overview
NameDY256853
Unique NameDY256853
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1300
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY256853 vs. ExPASy Swiss-Prot
Match: AMPM_SULSO (Methionine aminopeptidase OS=Sulfolobus solfataricus GN=map PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.919e-15
Identity = 61/193 (31.61%), Postives = 95/193 (49.22%), Query Frame = 2 
Query:   26 LLEASREATNTRIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHY-MKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGET--KYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLR 595
            LL+AS+ A    I      + + +IG  I++V+ +            K IRNL GH I RY++HAG  +P V       ++    +AIE FA+ G G V E    + Y +KN ++  +     R  +L+  I   F+ L F  R+L        +    +KNL   G ++ YP L +IK   VSQFEHT++++
Sbjct:  110 LLDASKTALEAAITNFKAGLSIGEIGRVIEKVIRAQGY---------KPIRNLGGHLIRRYELHAGVFIPNVYERGLGVIQSDSVYAIEPFATDGGGEVVEGKSITIYSLKNPNIKGLS---SRENELIDFIYTRFNYLPFSERWLKEFSTNVDELRNNIKNLVKKGALRGYPILIEIKKGVVSQFEHTVIVK 290
The following BLAST results are available for this feature:
BLAST of DY256853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
AMPM_SULSO4.919e-1531.61Methionine aminopeptidase OS=Sulfolobus solfataric... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2CC11ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256853 ID=DY256853; Name=DY256853; organism=Citrus clementina; type=EST; length=1300bp
GGCATTCAATCCTATGCTTGATCCATTGCTTGAAGCTTCACGAGAAGCAA
CCAATACGCGTATCAAGGAAGCAGGGATCGATGTCCGACTTTGTGATATT
GGTGCCGCAATCCAAGAAGTCATGGAGTCATACGAGGTTGAAATAAATGG
AAAGGTGTTTCAAGTTAAAAGTATCCGGAACTTGAATGGACACAGCATTG
GGCGTTATCAGATCCATGCTGGAAAGTCTGTTCCAATTGTGAAAGGAGGG
GAGCAGACAAAGATGGAAGAGGGTGAATTTTTCGCAATTGAAACCTTTGC
GTCAACAGGGAAAGGATATGTCAGAGAAGATCTTGAGTGCAGCCATTACA
TGAAAAATTTTGATGTTGGCCACATCCCACTGAGGCTTCCCAGAGCCAAG
CAACTATTAGCAACAATCAACAAGAATTTCTCTACATTGGCATTCTGTAG
ACGGTATTTAGATCGCCTTGGAGAGACTAAATATCTGATGGCCCTGAAGA
ATTTGTGTGATACTGGCATTGTTCAGCCATATCCTCCTCTCTGCGACATT
AAAGGCAGTTATGTGTCTCAGTTCGAGCATACCATCTTACTACGGCCGAC
CTGCAAAGAGGTGATATCCAGAGGAGATGACTACTGAAGTGGATGATGTT
AAAATTTTGTCAGTAACTTATCTGCACGATTGCTGTACACCTTTTACCGT
TTGGACTGTAAAATTTTCTGTTGAAACCTCTTATTTGAGTGGAAGTGACG
ACGATGTTAGCTTCTCTTAGCTTAATGGTTTATAGCTTGAGGCAGAGCCA
GGACTAGATCAGTGTTTACTACCTATGTGATTATGCTGGTCGGCAAAGGT
TTTGTTCTCTTGGTAATGATTCAATAAAATTTTATTCCAACCNNNNNNAC
NNNNNNCCCCCCCCNCAAAACCCCCACCCCCAAAACAAAAAACAAAAAAA
AAAAAAACCCTTGTGGGGCCCCCCGGCCCCCAATAAACTTTAAAAACCAA
GAAACTAAAAGCTGGGCGCCCCAATTTCGAACCTCATTTGGCCCAATTCC
CCCCTAAAAGGGATTAAAATAAAATTTTCCGGGGGCGCCCTTTTTAAAAC
CCCTCTGGAGCGGGGAAAAACCCCGGGGGGTTTTCCCCCATTTAAAACTC
CCCTTTTCCCACAACTTCCCCCCTTTTTCCCCCCGGGGGGGGATAAAAAT
ACAACAAGAAAACGCCCCCCCCCCCCCAATTCCCCCCCTCTCTCCCCAAA
AAGATTGGGGCGCCCCGCCCGTCGGAGGAAGGGAGGGGGAAAGAAAAAGA
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