DY256864

Overview
NameDY256864
Unique NameDY256864
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1035
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y4814_ORYSJ (B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os04g0581400 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 7.168e-40
Identity = 80/117 (68.38%), Postives = 92/117 (78.63%), Query Frame = 3
Query:  243 GSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDR--QLYIDWKAR 587
            G D  +  ++ +F+K VTPSDVGKLNRLVIPKQHAEK+FPL S +  KGLLL+FED TGK+WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD VSF R        +L+IDWK R
Sbjct:   98 GEDVEVIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSAANEKGLLLSFEDRTGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAAEATRDRLFIDWKRR 214          
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y3209_ORYSJ (B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os03g0120900 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 7.168e-40
Identity = 81/125 (64.80%), Postives = 93/125 (74.40%), Query Frame = 3
Query:  219 GDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTG--GDRQLYIDWKAR 587
            G  V  + G       ++ +F+K VTPSDVGKLNRLVIPKQHAEK+FPL + S  KGLLL+FED TGK WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD VSF R  G     +L+IDW+ R
Sbjct:   17 GGEVQESGGRSLAAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAASNEKGLLLSFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRR 141          
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y2641_ORYSJ (B3 domain-containing protein Os02g0764100 OS=Oryza sativa subsp. japonica GN=Os02g0764100 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 9.361e-40
Identity = 89/139 (64.03%), Postives = 107/139 (76.98%), Query Frame = 3
Query:  264 ARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ-SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRST-GGDRQLYIDWK-----ARTGPVENPV---EPVQMMRLFGVNI 650
            AR+ LFEKAVTPSDVGKLNRL++PKQHAEKHFPL+ + S + G+LLNFED  GKVWRFRYS WNSSQSYVLTKGWSRFV+EK L+AGD + F  S  G D+ L+ID K     A TG  E P+   E  +++RLFG++I
Sbjct:   12 AREPLFEKAVTPSDVGKLNRLLVPKQHAEKHFPLRRTSSDASGVLLNFEDGEGKVWRFRYSCWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSGSAYGPDKLLFIDCKKNNTAAATGD-EKPITSGEATRVVRLFGMDI 149          
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: NGA3_ARATH (B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana GN=NGA3 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.223e-39
Identity = 76/110 (69.09%), Postives = 89/110 (80.91%), Query Frame = 3
Query:  267 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQ---LYIDWKAR 587
            ++ +F+K VTPSDVGKLNRLVIPKQHAE++FPL S +   G LLNF+D  GK+WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGDIVSF R  G + +   LYIDW+ R
Sbjct:   52 KEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHR 161          
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: NGA2_ARATH (B3 domain-containing transcription factor NGA2 OS=Arabidopsis thaliana GN=NGA2 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.597e-39
Identity = 77/110 (70.00%), Postives = 91/110 (82.73%), Query Frame = 3
Query:  267 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS---KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR 587
            R+ +F+K VTPSDVGKLNRLVIPKQHAE++FPL + +T+   KGLLLNFED +G  WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDIVSF R +    +LYIDW+ R
Sbjct:   19 REHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRR 128          
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y5625_ARATH (B3 domain-containing protein At5g06250 OS=Arabidopsis thaliana GN=At5g06250 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.349e-37
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 3
Query:  267 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQS----------GSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR 587
            ++ LFEK++TPSDVGKLNRLVIPKQHAEK+FPL +           S+ KG+LL+FED +GK WRFRYSYWNSSQSYVLTKGWSRFVK+K L  GD+V F R     R+L+I W+ R
Sbjct:   42 KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRR 158          
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y2608_ARATH (B3 domain-containing protein At2g36080 OS=Arabidopsis thaliana GN=ARF31 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.679e-37
Identity = 74/114 (64.91%), Postives = 89/114 (78.07%), Query Frame = 3
Query:  255 VLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS---KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKAR 587
            V++ ++ LFEK +TPSDVGKLNRLVIPKQHAE++FPL + +     KGLLL FED  GK WRFRYSYWNSSQSYVLTKGWSR+VKEK+L AGD+V FHR      + +I W+ R
Sbjct:   30 VVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRRR 143          
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y3158_ARATH (B3 domain-containing protein At3g11580 OS=Arabidopsis thaliana GN=ARF32 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.418e-37
Identity = 76/136 (55.88%), Postives = 96/136 (70.59%), Query Frame = 3
Query:  246 SDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS-----------TSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPV 620
            +D  +  R+ LFEK++TPSDVGKLNRLVIPKQHAEK+FPL + +           T KG+LL+FED +GK W+FRYSYWNSSQSYVLTKGWSR+VK+K+L AGD+V F R      +L+I W+ R     +P   V
Sbjct:   18 NDVAIAQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRGEASSSPAVSV 153          
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y1071_ORYSJ (Putative B3 domain-containing protein Os10g0537100 OS=Oryza sativa subsp. japonica GN=Os10g0537100 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.386e-35
Identity = 76/122 (62.30%), Postives = 89/122 (72.95%), Query Frame = 3
Query:  267 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQS-------------GSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTG--GDRQLYIDWKAR 587
            ++ +FEK VTPSDVGKLNRLVIPKQHAE++FPL +             G   KGL+L+FED TGK WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD VSF R  G     +L+ID++ R
Sbjct:   31 KEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPLDAAAGAGGGGGGGGGGGGGKGLVLSFEDRTGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVSFGRGLGDAARGRLFIDFRRR 152          
BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y1160_ORYSJ (B3 domain-containing protein Os11g0156000 OS=Oryza sativa subsp. japonica GN=Os11g0156000 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.877e-34
Identity = 75/124 (60.48%), Postives = 90/124 (72.58%), Query Frame = 3
Query:  267 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS-KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTG----GDRQLYIDWKAR--TGPVENPVEP 617
            ++ +FEK +TPSDVGKLNRLVIPKQHAE++FPL +G  + KGL+L+FED  G  WRFRYSYW SSQSYVLTKGWSR+VKEK L AGD+V F R  G    GDR L+I  + R      + P  P
Sbjct:   34 KEHMFEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTSSQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDR-LFIGCRRRGDAAAAQTPAPP 156          
The following BLAST results are available for this feature:
BLAST of DY256864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
Y4814_ORYSJ7.168e-4068.38B3 domain-containing protein Os04g0581400 OS=Oryza... [more]
Y3209_ORYSJ7.168e-4064.80B3 domain-containing protein Os03g0120900 OS=Oryza... [more]
Y2641_ORYSJ9.361e-4064.03B3 domain-containing protein Os02g0764100 OS=Oryza... [more]
NGA3_ARATH1.223e-3969.09B3 domain-containing transcription factor NGA3 OS=... [more]
NGA2_ARATH1.597e-3970.00B3 domain-containing transcription factor NGA2 OS=... [more]
Y5625_ARATH4.349e-3763.25B3 domain-containing protein At5g06250 OS=Arabidop... [more]
Y2608_ARATH5.679e-3764.91B3 domain-containing protein At2g36080 OS=Arabidop... [more]
Y3158_ARATH7.418e-3755.88B3 domain-containing protein At3g11580 OS=Arabidop... [more]
Y1071_ORYSJ2.386e-3562.30Putative B3 domain-containing protein Os10g0537100... [more]
Y1160_ORYSJ5.877e-3460.48B3 domain-containing protein Os11g0156000 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2CE10ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256864 ID=DY256864; Name=DY256864; organism=Citrus clementina; type=EST; length=1035bp
GTTTCCGCGGACGCGATGCCGTCACAAACTTCAAGCAAATGTCTTGTGCT
GGAACGTCCTCCGACGAGGGTGATATCGAAATGGCGTTCTTGAGCTCCCA
CTCCAAGTCCGAGATCGTCGATATGCTGAGGAAGCACACTTACAACGACG
AGCTCGAGCAGAGCAAAAGAAACTACGGCCTCGATGCCAACGGCAAGCGT
GTAATCAAACACGGGGAAGGTGATGGTGTTGCCACTGCCTTCGGTTCAGA
CCGGGTCCTTAAAGCGCGTGACCAGCTTTTTGAAAAGGCCGTTACCCCAA
GTGACGTGGGGAAGCTGAACCGGCTCGTGATACCCAAGCAGCACGCGGAG
AAGCACTTCCCTTTACAGAGCGGAAGCACTTCCAAGGGACTGCTCTTGAA
CTTTGAGGATGTCACCGGCAAAGTTTGGAGGTTTAGGTACTCCTACTGGA
ACAGCAGTCAAAGCTACGTTTTGACCAAAGGGTGGAGCCGGTTCGTCAAG
GAGAAGAATTTGAAAGCCGGTGACATTGTTAGCTTTCACAGATCGACCGG
TGGGGATAGGCAGCTTTACATTGATTGGAAAGCCAGAACAGGACCGGTCG
AGAACCCGGTCGAGCCGGTCCAGATGATGAGGCTATTTGGGGTCAACATT
TTCAAAATTCCTGGGAATGGTCTTGTTGGTGTCGATAAGATTGGGTGCAA
CATTAATAATAATAACGACGGCAAAAGGCTTAGAGAAATGGAGCTCTTGT
CTCTAGAGTGCAGCAAAAACAAAGAATGATTGGAGCTTCGTAACATCTTT
TTTCTTTTTTCTTTCTTTTTGTAATCCTATTTTCTGGTGTAATTTTTTCT
TTTCTTTTTTCCTTTTGGGATTTTTTGGAATTTTGAGGAGTTTTAAGGGG
GAAGAAGAAAATGGGGGAAGGTTGGGGGCCATTAATTGCCAGTTTCAAAG
GAAAAAGGAAAGGTTGAATTTGAAAATTACAAGTGGCCAAAGCCTAAAAA
ACCTGAAATTAGGGTTGGACAAAATTTTTAAAATT
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