DY256864

Overview
NameDY256864
Unique NameDY256864
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1035
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY256864 vs. ExPASy Swiss-Prot
Match: Y2559_ORYSJ (Putative B3 domain-containing protein Os02g0455900 OS=Oryza sativa subsp. japonica GN=Os02g0455900 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.131e-11
Identity = 40/100 (40.00%), Postives = 55/100 (55.00%), Query Frame = 3 
Query:  276 LFEKAVTPSDVG-KLNRLVIPKQHAEKHFPLQSGSTSKG----LLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDR 560
            LF K + PSDV     +LVIP +H  K   +   +  +G    +++   +VTGK+W FRY  W     + LTKGW  + +EK L+AGD VSF  ST   R
Sbjct:   28 LFGKVLMPSDVSWDTEQLVIPDEHVGKLLDMVVMNRPEGGFFVVVVEDGEVTGKLWLFRY--WKRDDVHCLTKGWGCYAREKGLRAGDTVSFFHSTACGR 125
The following BLAST results are available for this feature:
BLAST of DY256864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
Y2559_ORYSJ9.131e-1140.00Putative B3 domain-containing protein Os02g0455900... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2CE10ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256864 ID=DY256864; Name=DY256864; organism=Citrus clementina; type=EST; length=1035bp
GTTTCCGCGGACGCGATGCCGTCACAAACTTCAAGCAAATGTCTTGTGCT
GGAACGTCCTCCGACGAGGGTGATATCGAAATGGCGTTCTTGAGCTCCCA
CTCCAAGTCCGAGATCGTCGATATGCTGAGGAAGCACACTTACAACGACG
AGCTCGAGCAGAGCAAAAGAAACTACGGCCTCGATGCCAACGGCAAGCGT
GTAATCAAACACGGGGAAGGTGATGGTGTTGCCACTGCCTTCGGTTCAGA
CCGGGTCCTTAAAGCGCGTGACCAGCTTTTTGAAAAGGCCGTTACCCCAA
GTGACGTGGGGAAGCTGAACCGGCTCGTGATACCCAAGCAGCACGCGGAG
AAGCACTTCCCTTTACAGAGCGGAAGCACTTCCAAGGGACTGCTCTTGAA
CTTTGAGGATGTCACCGGCAAAGTTTGGAGGTTTAGGTACTCCTACTGGA
ACAGCAGTCAAAGCTACGTTTTGACCAAAGGGTGGAGCCGGTTCGTCAAG
GAGAAGAATTTGAAAGCCGGTGACATTGTTAGCTTTCACAGATCGACCGG
TGGGGATAGGCAGCTTTACATTGATTGGAAAGCCAGAACAGGACCGGTCG
AGAACCCGGTCGAGCCGGTCCAGATGATGAGGCTATTTGGGGTCAACATT
TTCAAAATTCCTGGGAATGGTCTTGTTGGTGTCGATAAGATTGGGTGCAA
CATTAATAATAATAACGACGGCAAAAGGCTTAGAGAAATGGAGCTCTTGT
CTCTAGAGTGCAGCAAAAACAAAGAATGATTGGAGCTTCGTAACATCTTT
TTTCTTTTTTCTTTCTTTTTGTAATCCTATTTTCTGGTGTAATTTTTTCT
TTTCTTTTTTCCTTTTGGGATTTTTTGGAATTTTGAGGAGTTTTAAGGGG
GAAGAAGAAAATGGGGGAAGGTTGGGGGCCATTAATTGCCAGTTTCAAAG
GAAAAAGGAAAGGTTGAATTTGAAAATTACAAGTGGCCAAAGCCTAAAAA
ACCTGAAATTAGGGTTGGACAAAATTTTTAAAATT
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