DY256867

Overview
NameDY256867
Unique NameDY256867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1287
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 3.835e-12
Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTIRSFALHLLHQQALRFHRKWRSKSFIGPT 344
            E+ CPG+VSC+DIVALA RD++S        +EV TGRRDG VS  + A   +P    +   LK     KGL  KDLV+LS  HTI + A   + ++   F    +    I PT
Sbjct:  109 EAACPGVVSCSDIVALAARDAIS--LANGPAYEVPTGRRDGRVSNMSLAK-DMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPT 219          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.257e-11
Identity = 44/133 (33.08%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCK-SLADTTTT--AKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 648
            G +HC   ++RLY      + +PSL+P +   +  KC  S+ D       + D G+     ++YY  +++NKGL   D  L  +K  R IV ++ ++Q  FF EF ++++ +   N LTG++GEIRK+C++ N
Sbjct:  200 GRTHCVKLVHRLYP-----EVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLAN 327          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.257e-11
Identity = 45/135 (33.33%), Postives = 65/135 (48.15%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQ---NPSLDPRYTAFLKTKCKSLADTTT--TAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTE-FAQSMKRMGAMNVLTGTQGEIRKKCSVIN 648
            G S C  F  R+++ + N      +  L P Y   L+  C S    TT  T  +DPG+     ++YY +L    GLF SD  L  N     +V    + +  + E FA +M +MG + V TGT GE+R  C V+N
Sbjct:  205 GRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNPQMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVN 339          

HSP 2 Score: 69.3218 bits (168), Expect = 5.538e-11
Identity = 48/110 (43.64%), Postives = 59/110 (53.64%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTI-RSFALHLLHQQALRFHRKWRSKS 329
            E  CP  VSCADIVA A RDS+S        ++V  GRRDG VS A E  + LP P +    L      K L+V+D+VVLSG HT+ RSF        A  F R W + +
Sbjct:  122 EQSCPRTVSCADIVAFAARDSISLTGSVS--YQVPAGRRDGRVSNATET-VDLPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFC-------ASFFKRVWNTST 221          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.446e-11
Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTI-----RSFALHL 281
            E+ CPG+VSCADI+A+A RDSV      P  W VL GRRD + +  A A+  LP+P  +   L      K L+  DLV LSG HTI     ++F  H+
Sbjct:  113 EAVCPGVVSCADILAVAARDSV-VALGGPS-WRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHI 208          
The following BLAST results are available for this feature:
BLAST of DY256867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
PER43_ARATH3.835e-1241.23Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER42_ARATH3.257e-1133.08Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER1_MAIZE3.257e-1133.33Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER70_MAIZE9.446e-1143.88Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2CF03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256867 ID=DY256867; Name=DY256867; organism=Citrus clementina; type=EST; length=1287bp
TCGAGAGCAGGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGCTTTG
GCTACCAGGGATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGTGGGA
AGTGCTCACCGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAGGCCG
ATCTGCTGCTTCCTTCACCTTTTGCCAACTTCAATGAACTCAAGAAAAAT
CTTAACGACAAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAGGTGG
CCACACAATACGGAGTTTCGCACTGCACCTTCTTCATCAACAGGCTCTAC
GATTTCACAGGAAATGGAGATCAAAATCCTTCATTGGACCCACGATACAC
TGCATTCTTAAAAACCAAATGCAAGAGCCTTGCCGACACAACGACTACTG
CCAAATTGGACCCGGGGAGTTTTCGAAAATTCTACAGCCATTACTATGAT
ATTCTTATCGAGAACAAGGGTCTATTCCAATCTGATGCTGCTCTTTTAAC
CAATAAGGGAGCAAGAAACATTGTCATGGAGTTGAGAAACCAAGATAAGT
TCTTCACCGAGTTTGCTCAATCAATGAAAAGAATGGGAGCTATGAATGTT
CTCACTGGCACTCAAGGGGAGATTCGAAAGAAGTGCAGTGTTATTAATAA
TCCAGATAGTTTGTTGCATTCATCTATCTGATGTCAATGTAATTGCCAAT
TTAGTCTGCTGCTGGGCTTGTGGGTTTGTTAAGATCTGTTGATAATTGTA
CCACGGAATAAATTAAGGATGTGGGTGTGTGTGTGCAGCTGACCCCCTAA
TTTGTATCATTGAATAGGCTGTACGTTTATCACTAACCAGCTACCTTTCT
TATCGAAAAAAAAAAAAAAAAAAAAAAAGACAAAACCTGTCCGCCCCCCT
CGGCCCAAGCCAACTTTAGACTCGAGGCAGCTTTATGCAGGCGCCCGCCA
TTTTAGCCCCTCTTGCCCAATTCCCCCAAATTGTAGTCGTAATTAATTTA
CTTGGCCGGCCTTTTAAAAACCCCTGGGAGGGGAAAAACCCTGGGGGTTA
CCCAATTTAAATCCCCCTGGCCCCAATTCCCCCCTTTCCCCCAAAGGGGC
CATAAAACCAAAAAGAGCCCTCCCCCCAAATTCCCCCTTCCCAAAAAATG
GGGGCCCGCCCGGGGATGGGGGCCGAGGGGGAATATTGGTGAGGCCTAAT
AATATATTTTTGGATTAATAATTTTTCCGCGCTTTACAAAATCTTTTTTG
TTTTTTTAAAAATCCCCCCCACATCTTATTTTTTTTT
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