DY256867

Overview
NameDY256867
Unique NameDY256867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1287
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 5.921e-21
Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKS-LADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIV-MELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 651
            G SHC  F +RLY    + + NP    R+ A LK  CK+   D T  A  D  +  KF + Y+  L    GL  SD  L+ +   +  V +   N+  FF +FA++M+++G + V     GE+R++C   NN
Sbjct:  204 GFSHCKEFSDRLYGSRADKEINP----RFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHFNN 331          

HSP 2 Score: 53.9138 bits (128), Expect = 5.921e-21
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTI 260
            E  CPG+VSCADI+A ATRD V+        ++V  GR+DG  S A +    +P       ++       G +++++V LSG HTI
Sbjct:  120 ELSCPGVVSCADILAQATRDLVT--MVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTI 203          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 2.207e-20
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTI 260
            E+ CPG+VSCADI+A+A RD V      P  W VL GRRD + S  ++    LP P ++   L    + K L   D+V LSG HTI
Sbjct:  115 EAACPGVVSCADILAVAARDGV-VALGGPS-WTVLLGRRDSTGSFPSQTS-DLPPPTSSLQALLAAYSKKNLDATDMVALSGAHTI 197          

HSP 2 Score: 56.9954 bits (136), Expect = 2.207e-20
Identity = 38/131 (29.01%), Postives = 61/131 (46.56%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTE-FAQSMKRMGAMNVLTGTQGEIRKKCSVINN 651
            G + C+ F   +Y+ T       +++  +   LK  C  ++  ++ A LD  +   F + YY  L+  KGL  SD  L  N    + V    +    FT  F  +M +MG +  LTGT G+IR  C  +N+
Sbjct:  198 GQAQCSSFNGHIYNDT-------NINAAFATSLKANCP-MSGGSSLAPLDTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDSTVSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQIRLTCWKLNS 320          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 4.847e-20
Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTI 260
            ES CP  VSCADI+A+A RDSV         WEV  GR+D   +    A   LPSP +  + L     + GL+  D+V LSGGHT+
Sbjct:  136 ESVCPETVSCADILAMAARDSVVVS--GGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTL 219          

HSP 2 Score: 54.299 bits (129), Expect = 4.847e-20
Identity = 37/131 (28.24%), Postives = 58/131 (44.27%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMEL--RNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 648
            G + CT F  RL         N   +  +   L+  C ++  +    +LD  +   F + YY  L+  +GL  SD AL         ++E    +Q  FF +F  +M +MG   +  G+  EIRK C +IN
Sbjct:  220 GKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGPSVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPGTRAIVETYATDQSVFFEDFKNAMVKMGG--IPGGSNSEIRKNCRMIN 348          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.323e-20
Identity = 41/131 (31.30%), Postives = 68/131 (51.91%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTE-FAQSMKRMGAMNVLTGTQGEIRKKCSVINN 651
            GV+HC+ F +R+ D        P +D +  A LK  C+   D +    +D  +  +  +  Y  +I+ + + + D  L+ +   R+IV +    +K F E FA++M++MG + VLTG  GEIR  C   NN
Sbjct:  190 GVAHCSLFQDRIKD--------PKMDSKLRAKLKKSCRGPNDPSVF--MDQNTPFRVDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGVLTGDSGEIRTNCRAFNN 310          

HSP 2 Score: 50.0618 bits (118), Expect = 6.323e-20
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 3
Query:   12 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVL-SGGHTI 260
            CP  VSCADIV +ATRDS++        ++V TGRRDG  S  ++  LL   P  +     K     G  V  +V L  GGHT+
Sbjct:  110 CPKTVSCADIVTIATRDSIA--LAGGPKFKVRTGRRDGLRSNPSDVKLL--GPTVSVATSIKAFKSIGFNVSTMVALIGGGHTV 189          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.389e-19
Identity = 36/87 (41.38%), Postives = 48/87 (55.17%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDG-SVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTI 260
            E  CPG+VSCADI+A+  RDSV     +   W V  GRRD  + S +     +LP P +  + L       GL+ +D+V LSG HTI
Sbjct:  116 ERLCPGVVSCADILAITARDSVLLMGGRG--WSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTI 200          

HSP 2 Score: 54.6842 bits (130), Expect = 1.389e-19
Identity = 35/128 (27.34%), Postives = 62/128 (48.44%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADT--TTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKC 636
            G + C  F +R+Y+ T       ++D  +    +  C +   +     A LD  +  KF   Y+  L+ ++GL  SD  L       +IV+   R+   F+ +F  +M +MG ++ LTG+ G+IR+ C
Sbjct:  201 GQARCVTFRSRIYNST-------NIDLSFALSRRRSCPAATGSGDNNAAILDLRTPEKFDGSYFMQLVNHRGLLTSDQVLFNGGSTDSIVVSYSRSVQAFYRDFVAAMIKMGDISPLTGSNGQIRRSC 321          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.807e-19
Identity = 44/134 (32.84%), Postives = 72/134 (53.73%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNP--SLDPRYTAFLKTKCKSLA-DTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIV-MELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 651
            G SHC  F +R+++     DQN    ++P+Y A L+  C +   D   +A  D  +  KF + YY  L    GL QSD A+  +   R++V +   ++  FF  FA++M+++   NV TG  GE+R++C   N+
Sbjct:  193 GFSHCKEFASRIFN---KSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAFNDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYND 323          

HSP 2 Score: 49.2914 bits (116), Expect = 1.807e-19
Identity = 32/86 (37.21%), Postives = 44/86 (51.16%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTI 260
            E +CP IVSC+DI+  ATR  +S     P +  V  GR+D  VS     +  L  P    + +       GLTV+++V L G HTI
Sbjct:  109 ELKCPNIVSCSDILVGATRSLISM-VGGPRV-NVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTI 192          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.480e-18
Identity = 41/131 (31.30%), Postives = 66/131 (50.38%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTE-FAQSMKRMGAMNVLTGTQGEIRKKCSVINN 651
            GV+HC+ F +RL D         +++P   + L+ KC S  D TT   LD  +     +  Y  +   +G+ + D  L  ++    IV    + +  F + FA+++ +MG + VLTG  GEIR+ C V NN
Sbjct:  190 GVAHCSLFQDRLSD--------RAMEPSLKSSLRRKCSSPNDPTTF--LDQKTSFTVDNAIYGEIRRQRGILRIDQNLGLDRSTSGIVSGYASSNTLFRKRFAEALVKMGTIKVLTGRSGEIRRNCRVFNN 310          

HSP 2 Score: 51.9878 bits (123), Expect = 1.480e-18
Identity = 36/87 (41.38%), Postives = 47/87 (54.02%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVL-SGGHTI 260
            E+ CP  VSCADIV LATRDSV+        + V TGRRDG  S     D+ LP P    +   +    +G+   D+V L  GGH++
Sbjct:  107 EAACPRTVSCADIVTLATRDSVA--LAGGPRFSVPTGRRDGLRS--NPNDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSV 189          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 7.150e-18
Identity = 44/133 (33.08%), Postives = 62/133 (46.62%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTT--TTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELR-NQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 651
            G + C+ F  R+Y     GD N  ++  Y A L+  C     +   + A LD  +   F + YY  L+  KGL  SD  L  N    N V     N   F + F  +M +MG +   TGTQG+IR  CS +N+
Sbjct:  189 GQAQCSTFRARIY----GGDTN--INAAYAASLRANCPQTVGSGDGSLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNTVRNFASNPAAFSSSFTTAMIKMGNIAPKTGTQGQIRLSCSRVNS 315          

HSP 2 Score: 49.2914 bits (116), Expect = 7.150e-18
Identity = 37/87 (42.53%), Postives = 46/87 (52.87%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKN-LNDKGLTVKDLVVLSGGHTI 260
            E+ C   VSCADI+ +A RDSV      P  W V  GRRD   +   EA+  LP   ++  EL+   L   GL   D+V LSG HTI
Sbjct:  104 EAICKQTVSCADILTVAARDSV-VALGGPS-WTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTI 188          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 8.004e-18
Identity = 52/144 (36.11%), Postives = 80/144 (55.56%), Query Frame = 1
Query:  259 YGVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELRN----QDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI 678
            +G + C F ++RLY+F+  G  +P+L+  Y   L+ +C    + +     D  +   F + YY  L E KGL QSD  L ++  A + +  +R+      KFF  F ++M RMG +  LTGTQGEIR  C V+N+ +SLLH  +
Sbjct:  200 FGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNS-NSLLHDIV 342          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.045e-17
Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 1
Query:  172 LPTSMNSRKILTTKVSLSKI----L*SFQVATQYGVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLT-NKGARNIV-MELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 651
            +P   N+ + + TK     +    L S   +   G S CT F  RLY+ +GNG  + +L   Y   L+ +C       T   LD  +  KF +HY+  LI  KGL  SD  L T NK ++ +V +   NQ+ FF +FA+SM +MG ++ LTG +GEIR+ C  +N+
Sbjct:  169 IPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLDFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVNH 334          
The following BLAST results are available for this feature:
BLAST of DY256867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
PER65_ARATH5.921e-2133.33Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER42_MAIZE2.207e-2044.19Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER40_ARATH4.847e-2044.19Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER8_ARATH6.323e-2031.30Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER68_ARATH1.389e-1941.38Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER6_ARATH1.807e-1932.84Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER44_ARATH1.480e-1831.30Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER1_HORVU7.150e-1833.08Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER1B_ARMRU8.004e-1836.11Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER72_ARATH1.045e-1735.54Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2CF03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256867 ID=DY256867; Name=DY256867; organism=Citrus clementina; type=EST; length=1287bp
TCGAGAGCAGGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGCTTTG
GCTACCAGGGATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGTGGGA
AGTGCTCACCGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAGGCCG
ATCTGCTGCTTCCTTCACCTTTTGCCAACTTCAATGAACTCAAGAAAAAT
CTTAACGACAAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAGGTGG
CCACACAATACGGAGTTTCGCACTGCACCTTCTTCATCAACAGGCTCTAC
GATTTCACAGGAAATGGAGATCAAAATCCTTCATTGGACCCACGATACAC
TGCATTCTTAAAAACCAAATGCAAGAGCCTTGCCGACACAACGACTACTG
CCAAATTGGACCCGGGGAGTTTTCGAAAATTCTACAGCCATTACTATGAT
ATTCTTATCGAGAACAAGGGTCTATTCCAATCTGATGCTGCTCTTTTAAC
CAATAAGGGAGCAAGAAACATTGTCATGGAGTTGAGAAACCAAGATAAGT
TCTTCACCGAGTTTGCTCAATCAATGAAAAGAATGGGAGCTATGAATGTT
CTCACTGGCACTCAAGGGGAGATTCGAAAGAAGTGCAGTGTTATTAATAA
TCCAGATAGTTTGTTGCATTCATCTATCTGATGTCAATGTAATTGCCAAT
TTAGTCTGCTGCTGGGCTTGTGGGTTTGTTAAGATCTGTTGATAATTGTA
CCACGGAATAAATTAAGGATGTGGGTGTGTGTGTGCAGCTGACCCCCTAA
TTTGTATCATTGAATAGGCTGTACGTTTATCACTAACCAGCTACCTTTCT
TATCGAAAAAAAAAAAAAAAAAAAAAAAGACAAAACCTGTCCGCCCCCCT
CGGCCCAAGCCAACTTTAGACTCGAGGCAGCTTTATGCAGGCGCCCGCCA
TTTTAGCCCCTCTTGCCCAATTCCCCCAAATTGTAGTCGTAATTAATTTA
CTTGGCCGGCCTTTTAAAAACCCCTGGGAGGGGAAAAACCCTGGGGGTTA
CCCAATTTAAATCCCCCTGGCCCCAATTCCCCCCTTTCCCCCAAAGGGGC
CATAAAACCAAAAAGAGCCCTCCCCCCAAATTCCCCCTTCCCAAAAAATG
GGGGCCCGCCCGGGGATGGGGGCCGAGGGGGAATATTGGTGAGGCCTAAT
AATATATTTTTGGATTAATAATTTTTCCGCGCTTTACAAAATCTTTTTTG
TTTTTTTAAAAATCCCCCCCACATCTTATTTTTTTTT
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