DY256867

Overview
NameDY256867
Unique NameDY256867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1287
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.365e-17
Identity = 49/140 (35.00%), Postives = 78/140 (55.71%), Query Frame = 1
Query:  259 YGVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELR----NQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLL 666
            +G + C F ++RLY+F+ +G  +P+LD  Y + L+ +C    + +     D  +   F + YY  L ENKGL QSD  L ++  A + +  +R     Q KFF  F ++M RMG ++  TG QGEIR  C V+N+   ++
Sbjct:  196 FGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCPRNGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAMIRMGNLSPSTGKQGEIRLNCRVVNSKPKIM 335          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.783e-17
Identity = 51/130 (39.23%), Postives = 74/130 (56.92%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 648
            G + C  F NRL++ TG    +P++DP + A L+T+C    D +    LD GS   + + YY+ L   +G+ QSD  L T+   R IV +L   +  F  EFA+SM RM  + V+TG  GEIR+ CS +N
Sbjct:  200 GTAGCGVFRNRLFNTTGQ-TADPTIDPTFLAQLQTQCPQNGDGSVRVDLDTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPATRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEIRRVCSAVN 328          

HSP 2 Score: 77.411 bits (189), Expect = 2.034e-13
Identity = 50/130 (38.46%), Postives = 69/130 (53.08%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTIRSFALHLLHQQALRFHRKWRSKSFIGPTIHCILKNQMQEPCRHN 392
            E+ CPG+VSCADI+ALA RD+V     +   W+V TGRRDG VS+A+ A+  LP P  +    ++  +  GL  +DLVVL GGHTI +    +   +         +     PTI      Q+Q  C  N
Sbjct:  117 EAACPGVVSCADILALAARDTVI--LTQGTGWQVPTGRRDGRVSLASNAN-NLPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFN-----TTGQTADPTIDPTFLAQLQTQCPQN 238          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.042e-17
Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = 1
Query:  238 SFQVATQYGVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVME---LRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDS 660
            S   A  +G   C  F NRL++F G G+ +P+L+    + L+  C      T    LD  +   F ++Y+  L  N GL QSD  L +N G+  + +      NQ  FF  F QSM +MG ++ LTG+ GEIR+ C V+N   S
Sbjct:  195 SLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQNGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVNGQSS 338          

HSP 2 Score: 74.7146 bits (182), Expect = 1.318e-12
Identity = 47/130 (36.15%), Postives = 64/130 (49.23%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTIRSFALHLLHQQALRFHRKWRSKSFIGPTIHCILKNQMQEPCRHN 392
            E+ CPGIVSC+DI+ALA+  SVS        W VL GRRDG  +  + A+  LPSPF   N +       GL   D+V LSG HT         + +   F+          PT++  L + +Q+ C  N
Sbjct:  119 ENACPGIVSCSDILALASEASVSLAGGPS--WTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNP----DPTLNSTLLSSLQQLCPQN 242          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.042e-17
Identity = 51/133 (38.35%), Postives = 67/133 (50.38%), Query Frame = 1
Query:  259 YGVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELR---NQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 648
            +G + C F   RLY+F G    +PSL+P Y   L+  C    + T     D  +   F   YY  L+  KGL QSD  L +  GA  I +  +   N   FF  F  +M RMG +  LTGTQGEIR+ C V+N
Sbjct:  201 FGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQNGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVN 333          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.042e-17
Identity = 51/144 (35.42%), Postives = 79/144 (54.86%), Query Frame = 1
Query:  259 YGVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELRN----QDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI 678
            +G + C F ++RLY+F+  G  +P+L+  Y   L+ +C    + +     D  +   F + YY  L E KGL QSD  L ++  A + +  +R+       FF  F ++M RMG +  LTGTQGEIR  C V+N+ +SLLH  +
Sbjct:  181 FGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSYADGTQTFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNS-NSLLHDIV 323          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.776e-17
Identity = 51/134 (38.06%), Postives = 66/134 (49.25%), Query Frame = 1
Query:  259 YGVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIV---MELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 651
            +G + C F   RLY+F G    +P+LDP Y   L+  C    + T     D  +   F   YY  L   KGL QSD  L +  GA  I    +   N   FF  F  +M RMG +  LTGTQGEIR+ C V+N+
Sbjct:  201 FGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQNGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQNCRVVNS 334          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.014e-16
Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCK-SLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMEL--RNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 648
            G S C FF  R+Y+ T       ++D  +    +  C  S    T  A LD  +  +F ++YY  L+ N+GL  SD  L  N G+++ ++     N  KFF++FA ++ +M  ++ LTG  GEIRK C VIN
Sbjct:   35 GQSECQFFKTRIYNDT-------NIDTNFATSRQANCPFSAGGETNLAPLDSLTPNRFDNNYYKDLVSNRGLLHSDQVLF-NGGSQDTLVRTYSTNNVKFFSDFAAAIVKMSKISPLTGIAGEIRKNCRVIN 158          

HSP 2 Score: 35.4242 bits (80), Expect = 1.014e-16
Identity = 17/33 (51.52%), Postives = 19/33 (57.58%), Query Frame = 3
Query:  162 PSPFANFNELKKNLNDKGLTVKDLVVLSGGHTI 260
            P P ++   L      KGLT  DL VLSGGHTI
Sbjct:    2 PGPSSDLTTLTTKFAAKGLTPSDLTVLSGGHTI 34          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.971e-16
Identity = 48/134 (35.82%), Postives = 66/134 (49.25%), Query Frame = 1
Query:  262 GVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFF-----TEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 648
            G S C FF NRL++F G    +P++DP + + L+  C           LD GS  KF + Y+  L   +G+ QSD AL  +   ++ V        F       EF +SM +M  + V TGT GEIRK CS  N
Sbjct:  197 GTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQNTGAANRVALDTGSQFKFDTSYFSNLRNRRGVLQSDQALWNDPSTKSFVQRYLGLRGFLGLTFNVEFGKSMVKMSNIGVKTGTDGEIRKICSAFN 330          

HSP 2 Score: 77.7962 bits (190), Expect = 1.557e-13
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTIRSFALHLLHQQALRFHRKWRSKSFIGPT 344
            E+ CPG+VSCADI+ALA RDSV         W+V TGRRDG VS A++    LP+P  + +  K+    KGL  +DLV L GGHTI +        +   F+    +   I P+
Sbjct:  114 EAACPGVVSCADILALAARDSVVLSGGLS--WQVPTGRRDGRVSQASDVS-NLPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPS 224          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.218e-16
Identity = 51/139 (36.69%), Postives = 76/139 (54.68%), Query Frame = 1
Query:  238 SFQVATQYGVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKCKSLADT-TTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELR-NQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 648
            S   A  +GV+HC  F +R    +     NP++D ++   L+ KC     + T T KLD  +   F + YY  LI  +GLF+SD  L+ +   + +      NQ  FF +FA+SM +M  M++LTGT+GEIR  C+V N
Sbjct:   19 SLSGAHTFGVAHCPAFEDR----SSRVRHNPAIDGKFATALRNKCSGDNPSGTLTQKLDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHPTTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTKGEIRNNCAVPN 153          

HSP 2 Score: 23.0978 bits (48), Expect = 2.218e-16
Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  207 DKGLTVKDLVVLSGGHT 257
            ++ L V DLV LSG HT
Sbjct:    9 NRSLDVADLVSLSGAHT 25          
BLAST of DY256867 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.575e-16
Identity = 48/142 (33.80%), Postives = 74/142 (52.11%), Query Frame = 1
Query:  250 ATQYGVSHCTFFINRLYDFTGNGDQNPSLDPRYTAFLKTKC-----KSLADTTTTAKLDPGSFRKFYSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQ-DKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPD 657
            A   G +HC++ ++RLY+F   G  +P+++    + L+  C     K   D       D GS  +F S YY  ++ +  + + D  LL N  ++ I  E  +  + F   FA +M RMG++NVLTGT GEIR+ C V N  D
Sbjct:  197 AHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDPLVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNNDDSKEITQEFASGFEDFRKSFALAMSRMGSINVLTGTAGEIRRDCRVTNAND 338          

HSP 2 Score: 68.9366 bits (167), Expect = 7.233e-11
Identity = 46/127 (36.22%), Postives = 63/127 (49.61%), Query Frame = 3
Query:    3 ESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFNELKKNLNDKGLTVKDLVVLSGGHTIRSFALHLLHQQALRFHRKWRSKSFIGPTIHCILKNQMQEPC 383
            ESRCPG+VSCADI+ LATRD+V         + V TGRRDG    A   D  LPSP  + +E       KGL V D+  L G H++       +  +   F    +      PT++  L +Q++  C
Sbjct:  119 ESRCPGVVSCADILNLATRDAV--HMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKP----DPTMNTTLVSQLRYLC 237          
The following BLAST results are available for this feature:
BLAST of DY256867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
PER2_ARMRU1.365e-1735.00Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER71_ARATH1.783e-1739.23Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER54_ARATH3.042e-1735.42Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER23_ARATH3.042e-1738.35Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER1C_ARMRU3.042e-1735.42Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER3_ARMRU6.776e-1738.06Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PERX_LUPPO1.014e-1634.85Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]
PER2_ARAHY1.971e-1635.82Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER2_HORVU2.218e-1636.69Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]
PER61_ARATH2.575e-1633.80Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2CF03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256867 ID=DY256867; Name=DY256867; organism=Citrus clementina; type=EST; length=1287bp
TCGAGAGCAGGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGCTTTG
GCTACCAGGGATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGTGGGA
AGTGCTCACCGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAGGCCG
ATCTGCTGCTTCCTTCACCTTTTGCCAACTTCAATGAACTCAAGAAAAAT
CTTAACGACAAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAGGTGG
CCACACAATACGGAGTTTCGCACTGCACCTTCTTCATCAACAGGCTCTAC
GATTTCACAGGAAATGGAGATCAAAATCCTTCATTGGACCCACGATACAC
TGCATTCTTAAAAACCAAATGCAAGAGCCTTGCCGACACAACGACTACTG
CCAAATTGGACCCGGGGAGTTTTCGAAAATTCTACAGCCATTACTATGAT
ATTCTTATCGAGAACAAGGGTCTATTCCAATCTGATGCTGCTCTTTTAAC
CAATAAGGGAGCAAGAAACATTGTCATGGAGTTGAGAAACCAAGATAAGT
TCTTCACCGAGTTTGCTCAATCAATGAAAAGAATGGGAGCTATGAATGTT
CTCACTGGCACTCAAGGGGAGATTCGAAAGAAGTGCAGTGTTATTAATAA
TCCAGATAGTTTGTTGCATTCATCTATCTGATGTCAATGTAATTGCCAAT
TTAGTCTGCTGCTGGGCTTGTGGGTTTGTTAAGATCTGTTGATAATTGTA
CCACGGAATAAATTAAGGATGTGGGTGTGTGTGTGCAGCTGACCCCCTAA
TTTGTATCATTGAATAGGCTGTACGTTTATCACTAACCAGCTACCTTTCT
TATCGAAAAAAAAAAAAAAAAAAAAAAAGACAAAACCTGTCCGCCCCCCT
CGGCCCAAGCCAACTTTAGACTCGAGGCAGCTTTATGCAGGCGCCCGCCA
TTTTAGCCCCTCTTGCCCAATTCCCCCAAATTGTAGTCGTAATTAATTTA
CTTGGCCGGCCTTTTAAAAACCCCTGGGAGGGGAAAAACCCTGGGGGTTA
CCCAATTTAAATCCCCCTGGCCCCAATTCCCCCCTTTCCCCCAAAGGGGC
CATAAAACCAAAAAGAGCCCTCCCCCCAAATTCCCCCTTCCCAAAAAATG
GGGGCCCGCCCGGGGATGGGGGCCGAGGGGGAATATTGGTGAGGCCTAAT
AATATATTTTTGGATTAATAATTTTTCCGCGCTTTACAAAATCTTTTTTG
TTTTTTTAAAAATCCCCCCCACATCTTATTTTTTTTT
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