DY256888

Overview
NameDY256888
Unique NameDY256888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16
Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = 1
Query:    7 GNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNIPIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSLTAEQK 330
            G+   N  PAD+VFI+ +K H  F RDG+++I T  I+L EAL G ++ + TLDGR + + +++++ P     +   G+P    P +RG L I+F + FP ++++  K
Sbjct:  220 GDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSK 327          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.952e-16
Identity = 36/100 (36.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:   31 PADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNIPIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSLTAEQK 330
            PAD+VF++ +K H  F RDG+++I T  I+L EAL G ++ + T+DGR + + I++++ P     +   G+P    P +RG L I+F + FP ++++  K
Sbjct:  228 PADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGRTIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSK 327          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.162e-16
Identity = 39/108 (36.11%), Postives = 65/108 (60.19%), Query Frame = 1
Query:    7 GNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNIPIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSLTAEQK 330
            G+   N  PAD+VF++ +K H  F RDG++++ T  I+L EAL G ++ + T+DGR L + + +++ P     V   G+P    P +RG L I+F++ FP  ++A  K
Sbjct:  220 GDETPNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVTDIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASK 327          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 5.162e-16
Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 1
Query:    7 GNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDG-RILNIPIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSL 315
            G+   N  PAD+VFI+ +KPHS+F R+G DL  T  I+L +AL G  V + TL G RI   P   +I P     +   G+P+  EPS+RG L + F+IKFP +L
Sbjct:  217 GDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQALCGALVSVPTLQGSRIQVNPNHEIIKPTTTRRINGLGLPVPKEPSRRGDLIVSFDIKFPDTL 320          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.346e-15
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 1
Query:   46 FIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNIPIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSLTAEQKAGIN 342
            F++ EK H  F RDG+DLI T  ++  E+L G++  + T+DGR L +     + P+   T P +GMP    PS+RG L +K+ + +P SL   QK  I+
Sbjct:  251 FVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 349          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 9.735e-15
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 1
Query:   37 DVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNIPID--NVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSLTAEQ 327
            D+VF++ +K H  F R G DL V  T++L EAL G+   LT LDGR L I  +   V+ P+    +  EGMPI   P  +GKL I F ++FP SL+ +Q
Sbjct:  252 DIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQ 350          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.661e-14
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   25 VKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGR--ILNIPIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFP 306
            V+P D+V ++ EK H VF RDGNDL +T  I L EAL G+      LDGR  ++  P   VI P     V  EGMP    P ++G L IKF+++FP
Sbjct:  243 VEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.661e-14
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   25 VKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGR--ILNIPIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFP 306
            V+P D+V ++ EK H VF RDGNDL +T  I L EAL G+      LDGR  ++  P   VI P     V  EGMP    P ++G L IKF+++FP
Sbjct:  243 VEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.699e-14
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 1
Query:   37 DVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNIPID--NVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSLTAEQ 327
            D+VF++ +K H  F R G+DL    T++L EAL G+   LT LDGR L I  +   V+ P+    +  EGMP+   P  RGKL I+F + FP SLT +Q
Sbjct:  231 DIVFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQ 329          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.699e-14
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 1
Query:   37 DVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNIPI--DNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSLTAEQKAGI 339
            D+VF++ +K H  F R G DL V  TI+L EAL G+   LT LD R L I      V+ P+    +  EGMPI   P  +GKL I F ++FP SL+ +Q   I
Sbjct:  253 DIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAI 355          
The following BLAST results are available for this feature:
BLAST of DY256888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
DNJB4_HUMAN1.358e-1636.11DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJB4_BOVIN3.952e-1636.00DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJB4_MOUSE5.162e-1636.11DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNAJ1_DROME5.162e-1644.23DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
SIS1_YEAST3.346e-1538.38Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNAJ3_ARATH9.735e-1543.43Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJA2_HUMAN1.661e-1444.79DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN1.661e-1444.79DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJH1_ALLPO3.699e-1443.43DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ2_ARATH3.699e-1442.72Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DB10ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256888 ID=DY256888; Name=DY256888; organism=Citrus clementina; type=EST; length=609bp
GCGGGGGGAAATGTGCAGCAAAATGTTAAACCTGCAGACGTCGTCTTCAT
CGTCGACGAGAAGCCTCACAGTGTGTTTACTCGAGATGGGAATGATTTGA
TCGTCACAAGGACGATAACTCTCGGTGAGGCCTTGAAAGGTTATACGGTT
CGTCTCACCACCCTGGATGGAAGGATTTTGAACATCCCAATCGACAATGT
GATTCATCCCAACTATGAGATGACTGTCCCGAGAGAGGGGATGCCAATTC
AGAACGAGCCATCAAAGAGAGGCAAGTTGACAATCAAGTTCAACATCAAG
TTCCCAACAAGTTTGACTGCAGAGCAGAAGGCCGGGATCAACTTTTAAGT
TTTAACAGCTTTTAAATCGATGGTTACCTTGGTTTGGGTTGTTTCAGAGC
GGCGGTGTCCTAATTAATGTTTTTTTGGAGCTGGCTAAAGTTACAGCATC
TGTAAGTTACAGATGCTGCTTCAGCCCAGCAACCAACCTTGCTTTGCGTT
GCTTTTTCTCTGTAAGTCAGGACACGTGTGCTATTTGCTTTGGGCTTTTT
TTTTTTTCTTCAAAATGTGCGTCAGTTGTGTATAAATAAAGATTTTGACT
TTTGTCCTT
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