DY256888

Overview
NameDY256888
Unique NameDY256888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.310e-14
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:   37 DVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGR---ILNIPIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSLTAEQ 327
            D+VF++ +K H  F R G+DL V  T++L E+L G+   LT LDGR   I ++P   V+ P+    +  EGMP+   P  +GKL I F+++FP SL  EQ
Sbjct:  250 DIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLP-GEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQ 348          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.310e-14
Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = 1
Query:   37 DVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNIP--IDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSLTAEQ 327
            D+VF++ +K H  F R G DL    T++L EAL G+   LT LDGR L I   +  V+ P+    +  EGMPI   P  +GK+ I F ++FP SL  +Q
Sbjct:  252 DIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQ 350          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.310e-14
Identity = 43/96 (44.79%), Postives = 54/96 (56.25%), Query Frame = 1
Query:   25 VKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGR--ILNIPIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFP 306
            V+P D+V  V EK H VF RDGNDL +T  I L EAL G+      LD R  ++  P   VI P     V  EGMP    P ++G L IKF+++FP
Sbjct:  243 VEPGDIVLFVQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.241e-14
Identity = 42/96 (43.75%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   25 VKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGR--ILNIPIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFP 306
            V+P D+V ++ EK H VF RDGNDL +T  I L EAL G+      LD R  ++  P   VI P     V  EGMP    P ++G L IKF+++FP
Sbjct:  243 VEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.090e-13
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 1
Query:   37 DVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNIPID--NVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFPTSLTAEQ 327
            D+VF++ +K H  F R G+DL    +++L EAL G+   LT LD R L I  +   VI P+    +  EGMP+   P  RGKL I F++ FP SLT +Q
Sbjct:  252 DIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQ 350          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.090e-13
Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 1
Query:    7 GNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNI---PIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFP 306
            G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R + I   P   V H + +  V  EGMPI   P ++G+L I+F I FP
Sbjct:  228 GDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIK-CVLNEGMPIYRRPYEKGRLIIEFKINFP 329          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.342e-13
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 1
Query:    7 GNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNI---PIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFP 306
            G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R + I   P   V H + +  V  EGMPI   P ++G+L I+F + FP
Sbjct:  228 GDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIK-CVLNEGMPIYRRPYEKGRLIIEFKVNFP 329          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.342e-13
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 1
Query:    7 GNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNI---PIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFP 306
            G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R + I   P   V H + +  V  EGMPI   P ++G+L I+F + FP
Sbjct:  227 GDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIK-CVLNEGMPIYRRPYEKGRLIIEFKVNFP 328          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.342e-13
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 1
Query:    7 GNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNI---PIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFP 306
            G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R + I   P   V H + +  V  EGMPI   P ++G+L I+F + FP
Sbjct:  228 GDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIK-CVLNEGMPIYRRPYEKGRLIIEFKVNFP 329          
BLAST of DY256888 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.342e-13
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 1
Query:    7 GNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRILNI---PIDNVIHPNYEMTVPREGMPIQNEPSKRGKLTIKFNIKFP 306
            G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R + I   P   V H + +  V  EGMPI   P ++G+L I+F + FP
Sbjct:  228 GDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIK-CVLNEGMPIYRRPYEKGRLIIEFKVNFP 329          
The following BLAST results are available for this feature:
BLAST of DY256888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
DNJH_CUCSA6.310e-1442.00DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH_ATRNU6.310e-1441.41DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNJA2_RAT6.310e-1444.79DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE8.241e-1443.75DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJH2_ALLPO4.090e-1342.42DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ1_CERAE4.090e-1339.81DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA1_RAT5.342e-1338.83DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB5.342e-1338.83DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE5.342e-1338.83DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN5.342e-1338.83DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DB10ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256888 ID=DY256888; Name=DY256888; organism=Citrus clementina; type=EST; length=609bp
GCGGGGGGAAATGTGCAGCAAAATGTTAAACCTGCAGACGTCGTCTTCAT
CGTCGACGAGAAGCCTCACAGTGTGTTTACTCGAGATGGGAATGATTTGA
TCGTCACAAGGACGATAACTCTCGGTGAGGCCTTGAAAGGTTATACGGTT
CGTCTCACCACCCTGGATGGAAGGATTTTGAACATCCCAATCGACAATGT
GATTCATCCCAACTATGAGATGACTGTCCCGAGAGAGGGGATGCCAATTC
AGAACGAGCCATCAAAGAGAGGCAAGTTGACAATCAAGTTCAACATCAAG
TTCCCAACAAGTTTGACTGCAGAGCAGAAGGCCGGGATCAACTTTTAAGT
TTTAACAGCTTTTAAATCGATGGTTACCTTGGTTTGGGTTGTTTCAGAGC
GGCGGTGTCCTAATTAATGTTTTTTTGGAGCTGGCTAAAGTTACAGCATC
TGTAAGTTACAGATGCTGCTTCAGCCCAGCAACCAACCTTGCTTTGCGTT
GCTTTTTCTCTGTAAGTCAGGACACGTGTGCTATTTGCTTTGGGCTTTTT
TTTTTTTCTTCAAAATGTGCGTCAGTTGTGTATAAATAAAGATTTTGACT
TTTGTCCTT
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