DY256911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_BURXL (Regulator of ribonuclease activity A OS=Burkholderia xenovorans (strain LB400) GN=rraA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.116e-32 Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 363 TLKVF+ N L+R LEEKG RVLVVDGGGS RCA++GGN A NGWAGIV+NGC+RD E+N ++G+ ALA+ P + K G GE+ V + + G + GEW+YAD+DG+L++ A L Sbjct: 43 TLKVFEDNALVRATLEEKGAGRVLVVDGGGSQRCALVGGNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRRGQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVASAAL 163
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_ALHEH (Regulator of ribonuclease activity A OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=rraA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 2.339e-31 Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 363 T+K+F+ N +RE L E G RVLVVDGGGS+RCA+LG N NGWAG+VV GC+RD E+ D+GV+AL P+K+ KKGIGE+ V +T G I G+WLYAD DGI+++R L Sbjct: 38 TVKLFEDNSAVREALSEPGEGRVLVVDGGGSMRCALLGDNLAALGQKNGWAGVVVYGCVRDSAELATIDLGVKALNVHPLKSVKKGIGERDVTVTFAGITIQAGDWLYADEDGIVVARNSL 158
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEMY (Regulator of ribonuclease activity A OS=Pseudomonas mendocina (strain ymp) GN=rraA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.161e-30 Identity = 68/123 (55.28%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K + N L++E ++ G RVLVVDGGGSLR A+LG +A NGWAGIVV GCIRDVD I D+GV+ALAS PMK +K+GIG+ +VP+T GG GE+LYAD +GI++S LS+ Sbjct: 38 TIKCHEDNSLVKEQVDLPGEGRVLVVDGGGSLRRALLGDMLAEKAAKNGWAGIVVYGCIRDVDVIAQADLGVQALASHPMKTDKRGIGDLNVPVTFGGVTFKPGEYLYADNNGIIVSPQALSM 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEU2 (Regulator of ribonuclease activity A OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rraA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.980e-30 Identity = 66/123 (53.66%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 TLK F+ N +RE +E G +VLVVDGGGSLRCA+LG +A NGW G+++ GCIRDVD I D+GV+ALAS P K K+GIGE +VP+T GG GE+LYAD +G++IS + L++ Sbjct: 38 TLKCFEDNSRVREQVELDGKGKVLVVDGGGSLRCALLGDMLADKAAKNGWEGMLIYGCIRDVDVIAQTDLGVQALASHPKKTEKRGIGELNVPVTFGGVTFRPGEYLYADNNGVIISPSTLTM 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEPF (Regulator of ribonuclease activity A OS=Pseudomonas fluorescens (strain Pf0-1) GN=rraA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.586e-30 Identity = 63/123 (51.22%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E E KGN +VLVVDGGGSLRCA+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS P K K+G+G+ +VP+T G G+++YAD +G++IS + L + Sbjct: 39 TIKCFEDNSLVKEQAELKGNGKVLVVDGGGSLRCALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALASHPKKTEKRGLGDLNVPVTFAGVTFHPGQYIYADNNGVIISPSPLKM 161
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_HALHL (Regulator of ribonuclease activity A OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=rraA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 9.828e-30 Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 TLK+F+ NV +RE L G+ VLVVDGGGS+RCA+LG NGW+G ++ GC+RD E+ D GV+AL + P+K+ KKG+GE+ V +T G I G+WLYAD DG++++ EL++ Sbjct: 42 TLKLFEDNVRVRELLSAPGDGGVLVVDGGGSMRCALLGDRLAELGRENGWSGAIIYGCVRDSAELAQIDFGVQALNTHPLKSQKKGLGERDVSVTFAGVTIQSGDWLYADEDGVVVASRELTL 164
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_AZOVD (Regulator of ribonuclease activity A OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rraA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 3.735e-29 Identity = 63/123 (51.22%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L+++ ++ G +VLVVDGGGSLR A+LG +A NGW G+VV GCIRDVD I D+GV+ALA+ PMK +K+GIG+ +VP+T GG GE+LYAD +GI++S L + Sbjct: 38 TIKCFEDNSLVKDQVDTDGKGKVLVVDGGGSLRRALLGDMLAEKAARNGWEGLVVYGCIRDVDVIAQTDLGVQALATHPMKTDKRGIGDLNVPVTFGGVTFRPGEYLYADNNGIIVSPQPLKM 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSESM (Regulator of ribonuclease activity A OS=Pseudomonas syringae pv. tomato GN=rraA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 6.371e-29 Identity = 60/123 (48.78%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 TLK F+ N L++E +E G +VLVVDGGGSLRCA+LG +A +GW G+V+ GC+RDVD + D+GV+ALAS P ++ K+G+G+ +P+T GG GE+LYAD +G++IS + L++ Sbjct: 38 TLKCFEDNSLVKEQVELDGKGKVLVVDGGGSLRCALLGDMLAEKAAKHGWEGLVIYGCVRDVDMLAQTDLGVQALASYPKRSEKRGVGQLDLPVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEF5 (Regulator of ribonuclease activity A OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rraA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.087e-28 Identity = 62/123 (50.41%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E +E KG +VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS PMK +K+GIG+ +V +T G GE++YAD +G+++S + L + Sbjct: 39 TIKCFEDNSLVKEQVELKGQGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALASHPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEAE (Regulator of ribonuclease activity A OS=Pseudomonas aeruginosa GN=rraA PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.419e-28 Identity = 63/123 (51.22%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E +++ G +VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALAS P+K +K+GIG+ +V +T GG GE++YAD +GI++S L + Sbjct: 38 TIKCFEDNSLVKEQVDKDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKTDKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALKM 160 The following BLAST results are available for this feature:
BLAST of DY256911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256911 ID=DY256911; Name=DY256911; organism=Citrus clementina; type=EST; length=1120bpback to top |