DY256911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEAB (Regulator of ribonuclease activity A OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rraA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.419e-28 Identity = 63/123 (51.22%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E +++ G +VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALAS P+K +K+GIG+ +V +T GG GE++YAD +GI++S L + Sbjct: 38 TIKCFEDNSLVKEQVDKDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKTDKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALKM 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEA8 (Regulator of ribonuclease activity A OS=Pseudomonas aeruginosa (strain LESB58) GN=rraA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.419e-28 Identity = 63/123 (51.22%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E +++ G +VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALAS P+K +K+GIG+ +V +T GG GE++YAD +GI++S L + Sbjct: 38 TIKCFEDNSLVKEQVDKDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKTDKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALKM 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEA7 (Regulator of ribonuclease activity A OS=Pseudomonas aeruginosa (strain PA7) GN=rraA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.854e-28 Identity = 63/123 (51.22%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E +++ G +VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I ++GV+ALAS PMK +K+GIG+ +V +T GG GE++YAD +GI++S L++ Sbjct: 38 TIKCFEDNSLVKEQVDKDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTELGVQALASHPMKTDKRGIGDLNVVVTFGGVTFRPGEFVYADNNGIIVSPQALNM 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_LARHH (Regulator of ribonuclease activity A OS=Laribacter hongkongensis (strain HLHK9) GN=rraA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.129e-28 Identity = 62/117 (52.99%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 351 TLKVF+ N +RE L E G RVLVVDGGGS RCA++G A NGWAGIVV GCIRD + +GVRALA+ P+K+ K G+GE+ + +T G G+WLYAD DG++ S Sbjct: 38 TLKVFEDNSRVREMLSEPGEGRVLVVDGGGSRRCALVGDQLGALAVRNGWAGIVVYGCIRDSVALGLLPLGVRALATHPLKSVKNGVGERELAVTFDGATFRPGDWLYADEDGVITS 154
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEFS (Regulator of ribonuclease activity A OS=Pseudomonas fluorescens (strain SBW25) GN=rraA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 5.393e-28 Identity = 61/123 (49.59%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 TLK F+ N L++E ++ G +VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS PMK +K+GIG+ +V +T G GE++YAD +G+++S + L + Sbjct: 39 TLKCFEDNSLVKEQADQPGAGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALASHPMKTDKRGIGDLNVVVTFAGVTFRPGEYIYADNNGVIVSPSPLKM 161
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEP1 (Regulator of ribonuclease activity A OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rraA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 9.199e-28 Identity = 60/123 (48.78%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E +E G +VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS PMK +K+GIG+ +V +T G GE++YAD +G+L+S + L + Sbjct: 39 TIKCFEDNSLVKEQVELDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALASHPMKTDKRGIGDLNVVVTFAGVTFRPGEYVYADNNGVLVSPSPLKM 161
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSE14 (Regulator of ribonuclease activity A OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rraA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 9.199e-28 Identity = 63/125 (50.40%), Postives = 88/125 (70.40%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLE--EKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E +E KG +VLVVDGGGSLRCA+LG +A +GW G+++ GCIRDVD I D+GV+ALAS P K K+GIG+ +V +T GG GE+LYAD +G++IS + L++ Sbjct: 38 TVKCFEDNSLVKEQVELDGKGKGKVLVVDGGGSLRCALLGDMLAEKAARSGWEGMLIYGCIRDVDVIAQTDLGVQALASHPKKTEKRGIGDLNVLVTFGGVTFRPGEYLYADNNGVIISPSPLTM 162
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_CHRVO (Regulator of ribonuclease activity A OS=Chromobacterium violaceum GN=rraA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 9.199e-28 Identity = 58/117 (49.57%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 351 TLK+F+ N L+R+ L E GN RVLVVDGGGS RCA+LG A NGWAG+V++GC+RD + +GV+ALA+ P K+ K+ G++ +P+ + G I G+WLYAD DG+++S Sbjct: 38 TLKLFEDNSLVRQMLGEPGNGRVLVVDGGGSRRCALLGDQLGELAVKNGWAGLVIDGCVRDSAALGKLPLGVKALAAHPRKSVKRDSGQRDLPLRVAGCDILPGQWLYADEDGVIVS 154
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEPW (Regulator of ribonuclease activity A OS=Pseudomonas putida (strain W619) GN=rraA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.201e-27 Identity = 58/123 (47.15%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N ++E +E G +VLVVDGGGSLRCA+LG +A NGW G+V+ GC+RDVD + +GV+ALAS PMK +K+GIG+ +V +T G GE++YAD +G+++S + L + Sbjct: 39 TIKCFEDNSRVKEQVELDGKGKVLVVDGGGSLRCALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTSVGVQALASHPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLEM 161
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEPK (Regulator of ribonuclease activity A OS=Pseudomonas putida (strain KT2440) GN=rraA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.569e-27 Identity = 60/123 (48.78%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E +E G +VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS PMK +K+GIG+ +V +T G GE++YAD +G+L+S L + Sbjct: 39 TIKCFEDNSLVKEQVELDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALASHPMKTDKRGIGDLNVVVTFAGVTFRPGEYVYADNNGVLVSPKPLKM 161 The following BLAST results are available for this feature:
BLAST of DY256911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256911 ID=DY256911; Name=DY256911; organism=Citrus clementina; type=EST; length=1120bpback to top |