DY256911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA2_VIBVY (Regulator of ribonuclease activity A protein 2 OS=Vibrio vulnificus (strain YJ016) GN=rraA2 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.569e-27 Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 366 T+K F+ N LIRE LE+ G RVL+VDGGGSLR A+L G A N W GIVV GC+R+VDE+ +IG++ALAS P+ A +G+GE VP+ GG ++LYADT GI++S+ LS Sbjct: 38 TVKCFEDNALIRETLEQDGVGRVLLVDGGGSLRRALLDGELAAIAEENEWEGIVVYGCVREVDELEDMNIGIQALASIPVSAAMQGVGEVDVPVNFGGVTFLPEDYLYADTTGIILSQEPLS 159
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEE4 (Regulator of ribonuclease activity A OS=Pseudomonas entomophila (strain L48) GN=rraA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.677e-27 Identity = 58/123 (47.15%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E ++ G +VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS PMK +K+GIG+ +V +T G GE++YAD +G+++S + L + Sbjct: 39 TIKCFEDNSLVKEQVDLDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLVQTDVGVQALASHPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA2_VIBVU (Regulator of ribonuclease activity A protein 2 OS=Vibrio vulnificus GN=rraA2 PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 2.677e-27 Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 366 T+K F+ N LIRE LE+ G RVL+VDGGGSLR A+L G A N W GIVV GC+R+VDE+ +IG++ALAS P+ A +G+GE VP+ GG ++LYADT GI++S+ LS Sbjct: 38 TVKCFEDNALIRETLEQDGVGRVLLVDGGGSLRRALLDGELAAIAEENEWEGIVVYGCVREVDELEDMNIGIQALASIPVGAAMQGVGEVDVPVNFGGVTFLPEDYLYADTTGIILSQEPLS 159
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEU5 (Regulator of ribonuclease activity A OS=Pseudomonas stutzeri (strain A1501) GN=rraA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.496e-27 Identity = 57/123 (46.34%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L+++ ++ G +V+VVDGGGSLR A+LG +A NGW G+++ GC+RDVD + ++GV+ALAS PMK +K+GIG+ +VP+T G GE++YAD +GI++S LS+ Sbjct: 38 TIKCFEDNSLVKDQVDVDGTGKVMVVDGGGSLRRALLGDMLAEKAARNGWEGLIIYGCVRDVDVLAQTELGVQALASHPMKTDKRGIGDLNVPVTFCGVTFRPGEYVYADNNGIIVSPEPLSM 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PSEPG (Regulator of ribonuclease activity A OS=Pseudomonas putida (strain GB-1) GN=rraA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.496e-27 Identity = 59/123 (47.97%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L++E +E G +VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS PMK +K+GIG+ +V + G GE++YAD +G+L+S + L + Sbjct: 39 TIKCFEDNSLVKEQVELDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALASHPMKTDKRGIGDLNVVVAFAGVTFRPGEYVYADNNGVLVSPSPLEM 161
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_HAHCH (Regulator of ribonuclease activity A OS=Hahella chejuensis (strain KCTC 2396) GN=rraA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.266e-26 Identity = 55/123 (44.72%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N ++++ +++ G+ +V+VVDGGGS R A+LG +A NGW GI++ GCIRDVD I D+GV+AL + PMK +K+GIG+ + IT GG G ++YAD +G+++S LS+ Sbjct: 38 TVKCFEDNSVVKQQVDQPGHGKVMVVDGGGSKRAALLGDMLAEKAAANGWEGIIIYGCIRDVDVIRQTDLGVQALGTHPMKTDKRGIGDLNADITFGGVTFKPGHYVYADNNGVIVSPEPLSM 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_AZOSE (Regulator of ribonuclease activity A OS=Azoarcus sp. (strain EbN1) GN=rraA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.266e-26 Identity = 57/121 (47.11%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 363 TLKVF+ N L+R LE G +VLVVDGGGS+RCA++G + N WAG++V GCIRD I ++GV AL S P+K+ KKG G+ + +T GG + G ++YAD DG+++S + L Sbjct: 38 TLKVFEDNSLVRTALEGPGQGKVLVVDGGGSMRCALVGDQLALLGVKNQWAGVIVYGCIRDSKAIGTMELGVFALGSHPLKSIKKGAGDVDIAVTFGGVTFTPGHFIYADEDGVVVSESSL 158
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_THET2 (Regulator of ribonuclease activity A OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=rraA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.959e-26 Identity = 59/116 (50.86%), Postives = 81/116 (69.83%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 348 TL+VF+ N L+R+ LEE+G +VL VDGGGSLR A+LGGN A GWAG+VV+G +RD +E+ G IG+ ALA+ P K+ K+G GE VP+ + G + G +L AD DG+L+ Sbjct: 37 TLRVFEDNALVRKVLEEEGAGQVLFVDGGGSLRTALLGGNLARLAWERGWAGVVVHGAVRDTEELRGVPIGLLALAATPKKSAKEGKGEVDVPLKVLGVEVLPGSFLLADEDGLLL 152
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_THISH (Regulator of ribonuclease activity A OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=rraA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.865e-26 Identity = 57/116 (49.14%), Postives = 80/116 (68.97%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 348 T++ F+ NVL+R+ LE +G +VLVVDGGGSLRCA+ G A +NGWAG++VNGCIRDV I IGV+AL + P K+ K+G G +VP++ G GE ++AD DG+++ Sbjct: 44 TVRCFEDNVLVRQTLEAEGRGKVLVVDGGGSLRCALFGDMLAQTALDNGWAGVIVNGCIRDVAVIVTLPIGVKALGTHPRKSEKRGEGAVNVPVSFGAITFRPGERVFADEDGVVV 159
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_DEIRA (Regulator of ribonuclease activity A OS=Deinococcus radiodurans GN=rraA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.865e-26 Identity = 57/120 (47.50%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 360 TL++ + N L+R+ L+ G RVLVVDGGGSL CA+LGGN V NGW G++++GC+RD E+ D+G+RALA+ P ++ K GE+ VP+T G I G+ + AD DG L+ AE Sbjct: 39 TLRISENNPLVRQTLQTPGAGRVLVVDGGGSLNCALLGGNLGVFGVENGWEGVIIHGCVRDTAELRELDLGIRALAAHPRRSGKLEEGERDVPVTFAGVTIRPGDHVVADEDGWLVLGAE 158 The following BLAST results are available for this feature:
BLAST of DY256911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256911 ID=DY256911; Name=DY256911; organism=Citrus clementina; type=EST; length=1120bpback to top |